Pairwise Alignments

Query, 357 a.a., recombinase A (RefSeq) from Shewanella sp. ANA-3

Subject, 352 a.a., Protein RecA from Pseudomonas sp. DMC3

 Score =  495 bits (1274), Expect = e-145
 Identities = 246/347 (70%), Positives = 294/347 (84%)

Query: 3   VDPNKEKALAAVLSQIEKQFGKGSIMKLGEDRSMDVETISTGSLSLDVALGAGGLPMGRI 62
           +D NK+KALAA L QIE+QFGKG++M++G+     +  ISTGSL LD+ALG GGLP GRI
Sbjct: 1   MDDNKKKALAAALGQIERQFGKGAVMRMGDQDRQAIPAISTGSLGLDIALGIGGLPKGRI 60

Query: 63  VEIYGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
           VEIYGPESSGKTTLTL VIA AQ+ G TCAF+DAEHALDP YA KLGV++D+LL SQPDT
Sbjct: 61  VEIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDT 120

Query: 123 GEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
           GEQALEI D L RS AVDVIIVDSVAAL PKAEIEGE+GD H+GL AR+MSQA+RK+ GN
Sbjct: 121 GEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGN 180

Query: 183 LKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNE 242
           +K +N L+IFINQIRMKIGVMFG+PETTTGGNALKFYASVRLDIRRTGA+KEGDEVVG+E
Sbjct: 181 IKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE 240

Query: 243 TRVKVVKNKVAAPFKQAEFQILYGQGINRTGELVDLGVAHKLIEKAGAWYSYKGDKIGQG 302
           TRVKVVKNKVA+PF+QAEFQILYG+GI   GE++DLGV H  +EK+GAWY+Y+G KIGQG
Sbjct: 241 TRVKVVKNKVASPFRQAEFQILYGKGIYLNGEMIDLGVLHGFVEKSGAWYAYEGTKIGQG 300

Query: 303 RANAGKYLTENPAIAAEIDKTLRELLLSNPSAMSSSSSDDENSEGNV 349
           +AN+ K+L +NP IAA+++K LR+ LLS      S +S  + +E ++
Sbjct: 301 KANSAKFLADNPEIAAKLEKQLRDKLLSPAVIADSKASAVKETEDDL 347