Pairwise Alignments

Query, 357 a.a., recombinase A (RefSeq) from Shewanella sp. ANA-3

Subject, 348 a.a., DNA recombination/repair protein RecA from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  423 bits (1087), Expect = e-123
 Identities = 206/342 (60%), Positives = 263/342 (76%), Gaps = 1/342 (0%)

Query: 1   MKVDPNKEKALAAVLSQIEKQFGKGSIMKLGEDRSMDVETISTGSLSLDVALGAGGLPMG 60
           M V   K KAL   + +++K +GKG++MKL +++  D+  ISTGSL LD+ALG GGLP G
Sbjct: 1   MSVSNEKLKALQLTMDKLDKTYGKGTVMKLSDNKVEDIPAISTGSLGLDIALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQP 120
           R+VEIYGPESSGKTTLT+  IA AQR+G   AFIDAEHA D +YA+KLG+D +NLL SQP
Sbjct: 61  RVVEIYGPESSGKTTLTMHCIAEAQRKGGLAAFIDAEHAFDRVYAQKLGIDTENLLISQP 120

Query: 121 DTGEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLA 180
           D GEQALEI D L RSGA+D+I++DSVAAL PK E+EG++GDS MGL AR+MSQA+RKL 
Sbjct: 121 DNGEQALEIADHLIRSGAIDIIVIDSVAALVPKGELEGDMGDSKMGLQARLMSQALRKLT 180

Query: 181 GNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKE-GDEVV 239
           G + ++    IFINQ+R KIGVMFGNPETTTGGNALKFYASVRLDIRR G IKE  D + 
Sbjct: 181 GTINKTGCTCIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRIGQIKESADNIT 240

Query: 240 GNETRVKVVKNKVAAPFKQAEFQILYGQGINRTGELVDLGVAHKLIEKAGAWYSYKGDKI 299
           GN TRVKVVKNKVA PFK  EF I+YG+GI++ GE++DLGV   +++K+G+W+SY GDK+
Sbjct: 241 GNRTRVKVVKNKVAPPFKVVEFDIMYGEGISKVGEVLDLGVELGIVQKSGSWFSYNGDKL 300

Query: 300 GQGRANAGKYLTENPAIAAEIDKTLRELLLSNPSAMSSSSSD 341
           GQGR    + L +NP +  EI+  +R ++   P  ++++  D
Sbjct: 301 GQGRDGVKQILLDNPELMEEIEGKIRAIVKGEPEKVAAALDD 342