Pairwise Alignments

Query, 357 a.a., recombinase A (RefSeq) from Shewanella sp. ANA-3

Subject, 345 a.a., protein RecA from Kangiella aquimarina DSM 16071

 Score =  489 bits (1259), Expect = e-143
 Identities = 248/343 (72%), Positives = 289/343 (84%), Gaps = 5/343 (1%)

Query: 3   VDPNKEKALAAVLSQIEKQFGKGSIMKLGE-DRSMDVETISTGSLSLDVALGAGGLPMGR 61
           +D NK+KAL A L+QIE+QFGKGSIM+LG+   +  +ETISTGSL LD+ALG GGLP GR
Sbjct: 1   MDDNKKKALGAALTQIERQFGKGSIMRLGDGSAAKGIETISTGSLGLDIALGIGGLPKGR 60

Query: 62  IVEIYGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPD 121
           IVEIYGPESSGKTTL L+ IA  Q+ G T AF+DAEHALDPIYA+KLGV++D L+ SQPD
Sbjct: 61  IVEIYGPESSGKTTLALQAIANCQKNGGTAAFVDAEHALDPIYAEKLGVNLDELIVSQPD 120

Query: 122 TGEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAG 181
           TGEQALEI D L RSGAVD+++VDSVAALTPKAEIEGE+GDSHMGL AR+MSQA+RKL  
Sbjct: 121 TGEQALEITDMLVRSGAVDIVVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKLTA 180

Query: 182 NLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGN 241
           N+K+SNTL +FINQIRMKIGVMFG+PETTTGGNALKFYASVRLDIRR G IK+GDE+VGN
Sbjct: 181 NIKRSNTLCVFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQIKQGDEIVGN 240

Query: 242 ETRVKVVKNKVAAPFKQAEFQILYGQGINRTGELVDLGVAHKLIEKAGAWYSYKGDKIGQ 301
           ETRVKVVKNKVA PFKQAEFQILYG+G +  GE++D GV H L+EKAGAWYSY GDKIGQ
Sbjct: 241 ETRVKVVKNKVAPPFKQAEFQILYGEGSSLEGEILDWGVKHDLVEKAGAWYSYNGDKIGQ 300

Query: 302 GRANAGKYLTENPAIAAEIDKTLRELLLSNPSAMSSSSSDDEN 344
           G+ N  ++L +NP I  EI+  LR  LL      +SSSSD+E+
Sbjct: 301 GKQNVIQFLKDNPQIKEEIEGKLRSELL----VTASSSSDEED 339