Pairwise Alignments

Query, 526 a.a., peptide chain release factor 3 (RefSeq) from Shewanella sp. ANA-3

Subject, 529 a.a., peptide chain release factor 3 from Escherichia coli ECRC98

 Score =  838 bits (2165), Expect = 0.0
 Identities = 406/521 (77%), Positives = 457/521 (87%), Gaps = 1/521 (0%)

Query: 7   EVDKRRTFAIISHPDAGKTTITEKVLLFGNALQKAGTVKGKKSGQHAKSDWMEMEKDRGI 66
           EV KRRTFAIISHPDAGKTTITEKVLLFG A+Q AGTVKG+ S QHAKSDWMEMEK RGI
Sbjct: 9   EVAKRRTFAIISHPDAGKTTITEKVLLFGQAIQTAGTVKGRGSNQHAKSDWMEMEKQRGI 68

Query: 67  SITTSVMQFPYGGALVNLLDTPGHEDFSEDTYRTLTAVDSCLMVIDSAKGVEDRTIKLME 126
           SITTSVMQFPY   LVNLLDTPGHEDFSEDTYRTLTAVD CLMVID+AKGVEDRT KLME
Sbjct: 69  SITTSVMQFPYHDCLVNLLDTPGHEDFSEDTYRTLTAVDCCLMVIDAAKGVEDRTRKLME 128

Query: 127 VTRLRDTPIVTFMNKLDRDIRDPIELMDEVEDVLNIACAPITWPIGSGKEFKGVYHILRD 186
           VTRLRDTPI+TFMNKLDRDIRDP+EL+DEVE+ L I CAPITWPIG GK FKGVYH+ +D
Sbjct: 129 VTRLRDTPILTFMNKLDRDIRDPMELLDEVENELKIGCAPITWPIGCGKLFKGVYHLYKD 188

Query: 187 EVVLYQSGMGHTIQERRVIEGIDNPELDKAIGS-YAADLRDEMELVRGASNEFDHQAFLK 245
           E  LYQSG GHTIQE R+++G++NP+LD A+G   A  LRDE+ELV+GASNEFD + FL 
Sbjct: 189 ETYLYQSGKGHTIQEVRIVKGLNNPDLDAAVGEDLAQQLRDELELVKGASNEFDKELFLA 248

Query: 246 GELTPVFFGTALGNFGVDHILDGIVEWAPKPLPRESDARMIMPDEEKFTGFVFKIQANMD 305
           GE+TPVFFGTALGNFGVDH+LDG+VEWAP P+PR++D R +   E+KFTGFVFKIQANMD
Sbjct: 249 GEITPVFFGTALGNFGVDHMLDGLVEWAPAPMPRQTDTRTVEASEDKFTGFVFKIQANMD 308

Query: 306 PKHRDRVAFMRVCSGRYEQGMKMHHVRIGKDVNVSDALTFMAGDRERAEVAYPGDIIGLH 365
           PKHRDRVAFMRV SG+YE+GMK+  VR  KDV +SDALTFMAGDR   E AYPGDI+GLH
Sbjct: 309 PKHRDRVAFMRVVSGKYEKGMKLRQVRTAKDVVISDALTFMAGDRSHVEEAYPGDILGLH 368

Query: 366 NHGTIRIGDTFTQGEKFRFTGVPNFAPEMFRRIRLRDPLKQKQLLKGLVQLSEEGAVQVF 425
           NHGTI+IGDTFTQGE  +FTG+PNFAPE+FRRIRL+DPLKQKQLLKGLVQLSEEGAVQVF
Sbjct: 369 NHGTIQIGDTFTQGEMMKFTGIPNFAPELFRRIRLKDPLKQKQLLKGLVQLSEEGAVQVF 428

Query: 426 RPLDSNDLIVGAVGVLQFEVVVGRLKSEYNVEAIYEGISVSTARWVYCKDERKLEEFRRK 485
           RP+ +NDLIVGAVGVLQF+VVV RLKSEYNVEA+YE ++V+TARWV C D +K EEF+RK
Sbjct: 429 RPISNNDLIVGAVGVLQFDVVVARLKSEYNVEAVYESVNVATARWVECADAKKFEEFKRK 488

Query: 486 CSQNLALDGGDNLTYIAPTMVNLNLSMERYPDIEFAKTREH 526
               LALDGGDNL YIA +MVNL L+ ERYPD++F +TREH
Sbjct: 489 NESQLALDGGDNLAYIATSMVNLRLAQERYPDVQFHQTREH 529