Pairwise Alignments

Query, 526 a.a., peptide chain release factor 3 (RefSeq) from Shewanella sp. ANA-3

Subject, 529 a.a., Peptide chain release factor 3 from Alteromonas macleodii MIT1002

 Score =  852 bits (2201), Expect = 0.0
 Identities = 418/529 (79%), Positives = 472/529 (89%), Gaps = 3/529 (0%)

Query: 1   MSDNKV--EVDKRRTFAIISHPDAGKTTITEKVLLFGNALQKAGTVKGKKSGQHAKSDWM 58
           MSD K+  E+ KRRTFAIISHPDAGKTTITEKVLLFG ALQ AGTVKGKKSGQHAKSDWM
Sbjct: 1   MSDKKLLEEIKKRRTFAIISHPDAGKTTITEKVLLFGRALQTAGTVKGKKSGQHAKSDWM 60

Query: 59  EMEKDRGISITTSVMQFPYGGALVNLLDTPGHEDFSEDTYRTLTAVDSCLMVIDSAKGVE 118
           EMEK+RGIS+TTSVMQFPY   LVNLLDTPGHEDFSEDTYRTLTAVDSCLMVID+AKGVE
Sbjct: 61  EMEKERGISVTTSVMQFPYSDHLVNLLDTPGHEDFSEDTYRTLTAVDSCLMVIDAAKGVE 120

Query: 119 DRTIKLMEVTRLRDTPIVTFMNKLDRDIRDPIELMDEVEDVLNIACAPITWPIGSGKEFK 178
           DRT KLMEVTRLRDTPIVTFMNKLDRDIRDP+EL+DEVE  L+I CAPITWPIG GK FK
Sbjct: 121 DRTRKLMEVTRLRDTPIVTFMNKLDRDIRDPMELLDEVETELDILCAPITWPIGCGKSFK 180

Query: 179 GVYHILRDEVVLYQSGMGHTIQERRVIEGIDNPELDKAIGSYAAD-LRDEMELVRGASNE 237
           GVYH+ RDE +LYQSG GHTIQ+ R+I+G+DNPELD A+GS  A+ LRDE+ELVRGASNE
Sbjct: 181 GVYHLHRDETILYQSGQGHTIQDVRIIKGLDNPELDTAVGSDLAETLRDELELVRGASNE 240

Query: 238 FDHQAFLKGELTPVFFGTALGNFGVDHILDGIVEWAPKPLPRESDARMIMPDEEKFTGFV 297
           F+ + FL+G+LTPVFFGTALGNFGVDH+LDG+VEWAP PL RE++   I   + KF+GFV
Sbjct: 241 FEQELFLEGQLTPVFFGTALGNFGVDHMLDGLVEWAPAPLGRETEEGTIESTDGKFSGFV 300

Query: 298 FKIQANMDPKHRDRVAFMRVCSGRYEQGMKMHHVRIGKDVNVSDALTFMAGDRERAEVAY 357
           FKIQANMDPKHRDR+AF R+ SG+YE+GMKM + R+GKDV +SDALTF+AGDR   E AY
Sbjct: 301 FKIQANMDPKHRDRIAFCRIVSGKYEKGMKMRNSRLGKDVRISDALTFLAGDRSLLEEAY 360

Query: 358 PGDIIGLHNHGTIRIGDTFTQGEKFRFTGVPNFAPEMFRRIRLRDPLKQKQLLKGLVQLS 417
            GDIIGLHNHGTIRIGDTFT G+ +RFTG+PNFAPE+F+RIRL+DPLKQKQLLKGL+QLS
Sbjct: 361 AGDIIGLHNHGTIRIGDTFTSGDNYRFTGIPNFAPELFKRIRLKDPLKQKQLLKGLIQLS 420

Query: 418 EEGAVQVFRPLDSNDLIVGAVGVLQFEVVVGRLKSEYNVEAIYEGISVSTARWVYCKDER 477
           EEGAVQVFRPL +NDLIVGAVGVLQF+VVV RLK+EYNV+A+YE I+VSTARWVY  +E+
Sbjct: 421 EEGAVQVFRPLANNDLIVGAVGVLQFDVVVARLKAEYNVDALYEHINVSTARWVYSDNEK 480

Query: 478 KLEEFRRKCSQNLALDGGDNLTYIAPTMVNLNLSMERYPDIEFAKTREH 526
           KL+EFRRK  QNLALDGGDNLTYIAPTMVNL L+ ERYPDI+F  TRE+
Sbjct: 481 KLDEFRRKGEQNLALDGGDNLTYIAPTMVNLQLAQERYPDIQFKNTREN 529