Pairwise Alignments

Query, 386 a.a., carbamoyl phosphate synthase small subunit (RefSeq) from Shewanella sp. ANA-3

Subject, 401 a.a., carbamoylphosphate synthase small chain from Agrobacterium fabrum C58

 Score =  359 bits (922), Expect = e-104
 Identities = 197/385 (51%), Positives = 246/385 (63%), Gaps = 8/385 (2%)

Query: 8   SALLVLEDGTVFTGTAIGADGLSVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNT 67
           +A+LVL DGTV  GT IGA G    EV FNT++TGY+EILTDPSY  QIVT T+PHIGN 
Sbjct: 13  TAMLVLADGTVIEGTGIGATGKVQAEVCFNTALTGYEEILTDPSYLGQIVTFTFPHIGNV 72

Query: 68  GTNNEDVE----SNGVHACGLIIRDLPLVASSFRNQQTLSDYLKANNVVGIADIDTRKLT 123
           GTN ED+E    +    A G+I +      S+FR  + L  +LKA  V+G+  IDTR LT
Sbjct: 73  GTNEEDIEDLTPAARRGAVGVIFKADITDPSNFRAVKHLDAWLKARGVIGLCGIDTRALT 132

Query: 124 RILREKGAQAGCIMAGAD--LDEAKALAAAKAFPGLKGMDLAKEVTTDKAYPWRKGSWRL 181
             +RE GA    I    +   D     A AKA+ GL G+DLA E T+ ++  W +  W  
Sbjct: 133 AWIRENGAPNAVIAHDPNGVFDIEALKAEAKAWSGLVGLDLAIEATSGQSSTWTETPWVW 192

Query: 182 VGGLPEDTPAEALKYKVVAYDYGVKQNILRMLVDRGCDVTVVPAKTSAADVLAMNPDGVF 241
             G      A+A KY VV  D+GVK+NILR+     C VTVVPA+TSA D+LA+ PDGVF
Sbjct: 193 NKGYGTLGEADA-KYHVVCVDFGVKRNILRLFAGLDCKVTVVPAQTSAEDILALKPDGVF 251

Query: 242 LSNGPGDPEPC-DYAIEAIQQILKTDTPIFGICLGHQLLALASGAKTLKMKFGHHGANHP 300
           LSNGPGDP    +YA+  IQ ++K++ PIFGICLGHQ+L LA GAKT KM  GHHGANHP
Sbjct: 252 LSNGPGDPAATGEYAVPVIQNLIKSELPIFGICLGHQMLGLAVGAKTEKMHQGHHGANHP 311

Query: 301 VSNIEKGNVMITSQNHGFAADEATLPANIKVTHKSLFDGSLQGIHLTDKPAFSFQGHPEA 360
           V +   G V I S NHGFA D  +LP  ++ TH SLFDG+  G+ +  KP FS Q HPEA
Sbjct: 312 VKDFTTGKVEIVSMNHGFAVDTKSLPEGVEETHTSLFDGTNCGLRIVGKPVFSVQHHPEA 371

Query: 361 SPGPNDAAPLFDHFIELIEQYRQNA 385
           SPGP D+  LF  F+ L+ + +  A
Sbjct: 372 SPGPQDSHYLFRRFVNLLRENKGEA 396