Pairwise Alignments

Query, 359 a.a., DNA polymerase IV (RefSeq) from Shewanella sp. ANA-3

Subject, 431 a.a., DNA polymerase IV from Rhizobium sp. OAE497

 Score =  192 bits (488), Expect = 1e-53
 Identities = 121/337 (35%), Positives = 184/337 (54%), Gaps = 10/337 (2%)

Query: 4   IIHIDMDCYFAAVEMRDFPEYRGKPLAVGGSRVQRGVISTCNYEARKFGVRSAMATGYAL 63
           + HID D ++AAVE RD PE   KP+ +GG +  RGV+ST  Y AR  GVRSAM    AL
Sbjct: 46  LAHIDCDAFYAAVEKRDNPELADKPVIIGGGK--RGVVSTACYIARIHGVRSAMPMFKAL 103

Query: 64  KLCPDLILVPGRMQVYKEVSQQIRAIFCRYTELIEPLSLDEAYLDVSDCKLFKGS--ATL 121
           + CP  +++   M+ Y  V +++R++    T L++PLS+DEA+L++   +       A  
Sbjct: 104 EACPQAVVIRPDMEKYGRVGREVRSMMQELTPLVQPLSIDEAFLELGGTERLHHDPPART 163

Query: 122 IAEAIRRDILAETGLTASAGVAPIKFLAKVASDLNKPNGQCVIPPDEVAEFVKSLSLRKI 181
           +A+  RR +  E G+T S G++  KFLAKVASDL KP G  VI  +E  EF+    +  I
Sbjct: 164 LAKFARR-VEKEVGITVSVGLSYCKFLAKVASDLQKPRGFSVIGREEAVEFLAPRPVTTI 222

Query: 182 PGVGKVTAEKLSSLGLNTCADVQAYPKQELIARFGKFGTVLVERAHGIDERGISVSRERK 241
            GVGK  A  L S G+ T   +Q   + +L+ R+G  G  L   + GID+R + ++   K
Sbjct: 223 WGVGKAFAATLESDGIRTIGQLQQMEETDLMRRYGSMGQRLARLSRGIDDREVHLNEAAK 282

Query: 242 SVGVETTLAQDIYTLEQCQQVMPGLIQELSSRLGRSAKGRQIHKQVVKLKFNDFKQTTIE 301
           SV  ETT  +DI   +    ++  L +++S RL +       H  V+K+K  DFK  T  
Sbjct: 283 SVSAETTFFEDISRHDDLVPILRNLSEKVSWRLKKDDIAG--HTVVLKMKTADFKLRTRN 340

Query: 302 HRSDEVSVV---MFYELLSQAMARQEGRGIRLLGVSV 335
            R ++ + +   +F   +       +G   RL+G+ V
Sbjct: 341 RRLEDPTQLADRIFRTGIELLEKETDGTKFRLIGIGV 377