Pairwise Alignments

Query, 359 a.a., DNA polymerase IV (RefSeq) from Shewanella sp. ANA-3

Subject, 368 a.a., DNA polymerase IV from Mucilaginibacter yixingensis YX-36 DSM 26809

 Score =  268 bits (684), Expect = 2e-76
 Identities = 157/342 (45%), Positives = 216/342 (63%), Gaps = 11/342 (3%)

Query: 1   MRKIIHIDMDCYFAAVEMRDFPEYRGKPLAVGGSRVQRG-VISTCNYEARKFGVRSAMAT 59
           +RKIIHIDMD ++A+VE RD P+YRGKP+ VGG    RG V++T +YEARKFGVRSAM +
Sbjct: 9   VRKIIHIDMDAFYASVEQRDNPDYRGKPIVVGGLPEGRGGVVATASYEARKFGVRSAMPS 68

Query: 60  GYALKLCPDLILVPGRMQVYKEVSQQIRAIFCRYTELIEPLSLDEAYLDVSDCKLFKGSA 119
             A +LCP  I V  R   YK+ S+QIR IF RYT+LIEPLSLDEAYLDV++ KL  GSA
Sbjct: 69  KKAKQLCPQAIFVRPRFDAYKDASRQIREIFSRYTDLIEPLSLDEAYLDVTEDKLGIGSA 128

Query: 120 TLIAEAIRRDILAETGLTASAGVAPIKFLAKVASDLNKPNGQCVIPPDEVAEFVKSLSLR 179
             +A  I++ I  E  LTASAGV+  KF+AK+ASD+NKP+G   I P  +  F++ L + 
Sbjct: 129 IEVATQIKQAIKDELNLTASAGVSINKFVAKIASDINKPDGLKFIGPSSIEAFMEQLPVD 188

Query: 180 KIPGVGKVTAEKLSSLGLNTCADVQAYPKQELIARFGKFGTVLVERAHGIDERGISVSRE 239
           K  GVG+VTA+K+  +GL+T AD++   + E+   FGK G        GID+R ++  RE
Sbjct: 189 KFYGVGRVTADKMKRMGLHTGADLKRLTEDEMQQHFGKVGRFYYRIVRGIDDRPVNPHRE 248

Query: 240 RKSVGVETTLAQDIYTLEQCQQVMPGLIQELSSRLGR-SAKGRQIHKQVVKLKFNDFKQT 298
            KS+G E T   D+ T E+    +  + + +  RL R   KGR I    +K+K++DF+Q 
Sbjct: 249 TKSLGAEDTFPYDLTTAEEMFPELEKITKTVCDRLERYGLKGRTI---TLKIKYSDFRQI 305

Query: 299 TIEHR-----SDEVSVVMFYELLSQAMARQEGRGIRLLGVSV 335
           T          D  +++   + L  A    + R IRLLG+S+
Sbjct: 306 TRNQSFPHPVGDAETIISTAKSLLLATGIDDVR-IRLLGISL 346