Pairwise Alignments

Query, 667 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  219 bits (558), Expect = 3e-61
 Identities = 157/500 (31%), Positives = 245/500 (49%), Gaps = 28/500 (5%)

Query: 184 NGELIGIGGMDILIDTIGKTLLAPIK--YRNYGQAFLMTDEGKLVYFPGFSDKFPPGSLA 241
           +G   GI G D+ ++ I   L +  +  Y   G+  L++  G+LV +   + K       
Sbjct: 225 DGAFQGIVGADLSVNFIQDMLTSADQKLYNGAGEMALISSNGRLVAYTKDASKL------ 278

Query: 242 NQIDSQFKDTSGFTALRQQMQREAQGFAEVTFNGVPQRVTFVSVGGDYPKQKWHLAFMLP 301
            +  S   D++  T L Q    E +   +     +   + F     D    +W L   LP
Sbjct: 279 GEKASDLLDSNELTNLNQLKAGEVRYDIDKEHGHIELFLPFTIGQAD---ARWTLMLQLP 335

Query: 302 HEVIEAPV------------TEAFWN--ACFVALGIMLLVGITVWLMLLPFRRQLSKLLD 347
              + A              T+ F    A  +  GI LLV   +WL+     R L +++ 
Sbjct: 336 LSAVMADSQKLQSDLEAQRKTDIFGMTIAGLLIAGIGLLV---IWLVGHGIARPLKQMVA 392

Query: 348 AMEDIAEGDSDLSQRILMEREDELGKLGDAFNRFAEKVQQMLLHTRNLTQEVGTGVMDAR 407
            + DIA+G+ DL++R+  +R DELG + + FN F  K+Q M+    +  Q+V        
Sbjct: 393 MLNDIAQGEGDLTRRLTSDRADELGAIANGFNTFLIKLQGMITQVVSSVQKVSDSSEHTA 452

Query: 408 QVCDLAVSSVSSQKQQIDSVATAATQMAQTSQEMAISAQRANDFAEKAQTQAHDGTQIVS 467
            +       V  Q  +ID VATA  +M  T+Q++A +A +A   A  A   A  G +IV 
Sbjct: 453 DIAIRTNQGVHKQMVEIDQVATAVHEMTATAQDVARNATQAAQAASHADQAASQGMRIVR 512

Query: 468 RATEGMKALSVQVIEAAKVIKELRSSSEQIGEVLSVIRNIADQTNLLALNAAIEAARAGE 527
             +  + AL+ ++ +A  V++ L   SE I  +L+ IR IA+QTNLLALNAAIEAARAGE
Sbjct: 513 DTSTSIGALAEEIGKAVSVVQTLAKDSENINAILTAIRGIAEQTNLLALNAAIEAARAGE 572

Query: 528 QGRGFAVVADEVRTLASRTQDSTANIQGIIQTLQQSALQAEQVMESGVEQARVGQDLTTQ 587
           QGRGFAVVADEVR LA +TQ +T  IQ +IQ LQQ      +VME    +         +
Sbjct: 573 QGRGFAVVADEVRNLAQKTQKATEEIQTMIQQLQQGTRDVVRVMEDSQSRTDESVQHAAK 632

Query: 588 VEQALSDIASAIVSIQQQTVEITVAIGQQAVVAEEVAQNVVSVRGLSDQSLLSSQDLSQS 647
             +AL  I  A+  I     +I  A  +Q+ VAE++ +NV+++  ++++    + + S +
Sbjct: 633 AAEALETITQAVSVINDMNTQIASAAEEQSAVAEDINRNVINIGQVANEVAGGADESSAA 692

Query: 648 LQGFEQATHELTRNIGQFKI 667
                +   +  R I QFK+
Sbjct: 693 SADLTKLAEQQRRLINQFKV 712