Pairwise Alignments

Query, 370 a.a., TRAP dicarboxylate transporter- DctP subunit (RefSeq) from Shewanella sp. ANA-3

Subject, 371 a.a., TRAP-type C4-dicarboxylate transport system from Magnetospirillum magneticum AMB-1

 Score = 62.0 bits (149), Expect = 3e-14
 Identities = 72/291 (24%), Positives = 133/291 (45%), Gaps = 41/291 (14%)

Query: 73  SHGRLQIHVYGAGEL--MPAFAVFDGVSQGKIQMAHAASYYWKGKAPASQFFSSIPFGMT 130
           S  R++  ++ A +L   P+  V D V  G   +   A  Y  G+ PA +    +PF M 
Sbjct: 80  SGNRIKCQIFPAMQLGGTPSQLV-DQVRNGVADIVWTAPGYSAGRFPAIEALE-LPF-MV 136

Query: 131 AQEMNG----WLHYGGGMALWEEVYRPFGIIPLAGGNTGMQMGGWF---NKPINSIADFK 183
           A  ++G    W +Y       ++ +  + ++ +      +  GG F   N  + S+A+ K
Sbjct: 137 ANALDGSRMTWDYYN---QFAKDEFAAYKVLAVH-----IDGGGLFHTANTEVKSLAEVK 188

Query: 184 GLKIRMPG-LGGEVLKRVGAVPVNMAGRELYGALQTGSIDAA----EWVGPVNDLAFGLH 238
           GLK+R P  L  + L+ +G VPV+M   ++  A+  G +D      E + P       + 
Sbjct: 189 GLKLRTPTRLAAKTLQSLGGVPVSMPPSQVADAIAKGVVDGGLLPWELMRPTK-----ID 243

Query: 239 KVAKYYYYPGWHEP---GSNMEFLINKGAFESLPQDLQAIVKTAARAINQD----MLDEY 291
           +V KY+  P    P    + +  L+NK  ++SLP DL+A++   +  +  +    + D+ 
Sbjct: 244 EVTKYHIAPPPGRPFPVATVLSVLMNKAKYDSLPADLKAVIDRNSGPVLVEAFGKVWDDV 303

Query: 292 TTRNVTALDTLVKDEGVVLKAFPPQVLTELERISQQVIEEQAEQDPMMRKV 342
           T  N+    T+   +   L+  P Q +    R + + +EE+  +D   RK+
Sbjct: 304 TAANLKYAATIPGTQVTNLEPAPYQAM----RDAAKPVEEEWVKDVTARKL 350