Pairwise Alignments

Query, 312 a.a., ABC transporter related (RefSeq) from Shewanella sp. ANA-3

Subject, 308 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

 Score =  228 bits (580), Expect = 2e-64
 Identities = 126/300 (42%), Positives = 182/300 (60%), Gaps = 7/300 (2%)

Query: 10  LEGLKKTYKGGVEAVKGISLTVEQGDFFALLGPNGAGKSTTIGIISSLVQKTAGSVQVFD 69
           +  L K+Y  G +A+KG+SL +++G+  ALLGPNGAGK+T I I+  LV    GSV V  
Sbjct: 7   IRNLTKSYANGFQALKGVSLDIKEGEILALLGPNGAGKTTLISIVCGLVNPGEGSVLVGG 66

Query: 70  FDIDKQLEEAKLCIGLVPQEFNFNQFETVLQIVVNQAGYYGVPKHIALERAEKYLSQLDL 129
            ++ K   + +  IGLVPQE   + FETV   V    G +G  K+ AL   E  L  L L
Sbjct: 67  HNVVKDFRQTRALIGLVPQELTTDMFETVWNTVSFSRGLHGQKKNPAL--IESILKSLSL 124

Query: 130 WDKRNSQSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWEFLKQINQQG 189
           WDK+++  R LSGGMKRR++IA+AL HEPK+L LDEPTAGVD+ LRR MW  + ++  +G
Sbjct: 125 WDKKDNMLRELSGGMKRRVLIAKALAHEPKVLFLDEPTAGVDVTLRRDMWNVVSELRAKG 184

Query: 190 VTIILTTHYLEEAEMLCRNIGIIDKGVLVECTSMKALLSKLNLETFILDLRRDIDVAP-T 248
           VTIILTTHY+EEAE +   +G+I+ G L+      AL+ KL  +   L+L + ++  P +
Sbjct: 185 VTIILTTHYIEEAEEIADRVGVINGGELLLVEEKTALMKKLGRKQLFLELTQPVERLPDS 244

Query: 249 LNGMVCRLTDPH---TLEVD-VAKDHNLNDVFTQLTAAKVEVLSMRNKSNRLEELFVELV 304
           L      L+D     T E++   +   + D+   L+AA +    +  + + LE++FV LV
Sbjct: 245 LAPFALTLSDDRSTITYEIEGNGEQGRIADLLGALSAANIHFKDISTRQSSLEDIFVSLV 304