Pairwise Alignments

Query, 809 a.a., RNAse R (RefSeq) from Shewanella sp. ANA-3

Subject, 769 a.a., ribonuclease R from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  378 bits (970), Expect = e-109
 Identities = 258/783 (32%), Positives = 405/783 (51%), Gaps = 38/783 (4%)

Query: 18  IPSREYIIEYLRSQKSPITRDSIAVALQIHDEEQLEALRRRLRAMERDGELVFTRGQSYG 77
           +P ++ ++ +LR   S    D IA    +   ++  ALR  +R +E +G L     + + 
Sbjct: 12  LPDKDTLVAFLREAGSAEKTD-IARHFGLKGGDR-RALREMIRELEAEGRLGKRGRKGFS 69

Query: 78  LPEKMDLISGTVLGHREGYG--FFKPDEGGDD----LFISNRDMLMYFHGDKVLAQKAGM 131
               +  +    +  R+G G  + +  E   D    + + ++       GD+VL +    
Sbjct: 70  EAGALPPVGVADVIERDGDGELYVRLVEASPDAPRAILMPDKSKAAPGLGDRVLVKF--- 126

Query: 132 DRKGRR--EARIVRLIQPRSAAIVGRFHVDSGMAFVIADDKRITQEILIATEDRNG-ARQ 188
            ++G    EAR+++ +   +  ++G     +    V   D+R ++++L+  + ++G  R 
Sbjct: 127 -QRGAEGWEARLIKKLDVGTNRVLGVIRKSARETRVEPVDRR-SKDVLVVPQAQSGDLRD 184

Query: 189 GDVVVVELTRRPGRFVKAAGKVTEVLGKQMAPGMEIEIALRNYDLPHTWSAVIEKKLRRI 248
           GD+V+  + +   R+    GK+ E +GK+  P     IA+  + +P  +S  +E   R  
Sbjct: 185 GDLVLAAIEKGDQRYGPKRGKILEHIGKEDDPRAASLIAIHAHGVPTGFSEAVE---REA 241

Query: 249 PDEVTEADKVGRVDLRDLPLVTIDGEDARDFDDAVYA----EVKPSGGWRLWVAIADVSY 304
            D+     K GR DLR++P +TID  DARD DDAVYA    + K  GGW +WVAIADV+ 
Sbjct: 242 EDQALPTLK-GREDLREVPFITIDPADARDHDDAVYAARDEDPKNEGGWIVWVAIADVAA 300

Query: 305 YVRTDSALDTEARARGNSVYFPSQVIPMLPEKISNGLCSLNPHVDRLCMVAEMTISARGK 364
           YVR  S LD EAR +GNS YFP +V PMLPE +SNGLCSL    +R C+   M     G+
Sbjct: 301 YVRPGSQLDREARDKGNSTYFPDRVEPMLPEVLSNGLCSLKEGENRACLAVRMVFDKDGR 360

Query: 365 LSGYKFYPAVMHSHARFTYTQVAAMLEGGPIAPEHEALFPHLQCLQSLYLALDEQRAERG 424
            + ++F   +M SHA+ +Y Q  A ++G P       +   L  L + Y A+ + R +R 
Sbjct: 361 KTEHRFVRGLMRSHAKLSYEQAQAAIDGQPDDTTGPIMEAILYPLWNAYHAMLKGRLKRS 420

Query: 425 AIAFETLETQFIFNDQRKIDKIVPRARNQAHKIIEECMILANVSAAKFVKKHKGEILYRV 484
            +  E+ E +        I  I  RA  +AH++IEE MI ANV AA+ +++ K  ++YRV
Sbjct: 421 PLQIESAERRIRMAPDGGIASIEKRASLEAHRLIEEMMIQANVCAAETLEQKKTPLIYRV 480

Query: 485 HESPSEQKLANFKEFLAERGLSMGGGLEPTPADYQNVMLQIADRPDAELIQVMLLRSMRQ 544
           H++PS++K+ N  +FL+  G     G   T   +  ++ +  +   A+++  ++LRS  Q
Sbjct: 481 HDTPSQEKIFNLADFLSTIGKPWNKGEPGTTKRFNKLLDETRNTEHADVVNEVVLRSQMQ 540

Query: 545 AIYTPDNEGHFGLALEEYAHFTSPIRRYPDLVLHRVIRYLLAKEKGEANEKWTSDGGYHY 604
           AIY+P+N GHFGL L+ YAHFTSPIRRY DL++HR +   L   K         DG    
Sbjct: 541 AIYSPENIGHFGLNLDRYAHFTSPIRRYSDLIVHRGLIRALNLGK---------DGLTDR 591

Query: 605 QLDELDLLGEECSNTERRADEATRDVSDWLKCEFMQDHVGDTFEAVIASVTNFGLFVRLN 664
           ++ EL  + E  + TERR+  A RD  D     ++++HVG TF   I  VT FGLF+RL 
Sbjct: 592 EIAELPAIAEGVTMTERRSMAAERDAMDRYIAAYLEEHVGATFAGRITGVTRFGLFIRLE 651

Query: 665 DLFIDGLVHISSLGSDYYQFDPMRQRLIGEHTGQIYQVGDPVTVKVAAVNLDDRQIDLVM 724
           D   DGLV +S+LGS+Y+  D     L+GE TG+ + +G  V VK+         +   M
Sbjct: 652 DTGADGLVPVSTLGSEYFTHDDRAHALVGERTGKRFTLGRMVEVKLREATPVTGGLVFEM 711

Query: 725 LGDSGKGGRRKSAPSREKPMTARERVNREGAKMAKAAKSTGAKSKAGSDKAGASKSKSKA 784
           L +     R  +AP+    +  R     +G  M    +  G K + GS  +G  K   K 
Sbjct: 712 LSEPEP--RDPNAPAPRYGIRGR---GGDGPPMRGKNRPGGPKPRNGSKPSGGLKGVRKG 766

Query: 785 GAK 787
             K
Sbjct: 767 KRK 769