Pairwise Alignments

Query, 432 a.a., methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq) from Shewanella sp. ANA-3

Subject, 571 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  251 bits (642), Expect = 3e-71
 Identities = 156/450 (34%), Positives = 245/450 (54%), Gaps = 32/450 (7%)

Query: 10  LAESETKRREAEAVVDSIKASIATIEFTPDGIILDANPLFLKAVGYSLDEIVGKHHKLFC 69
           + + + +  ++   + +I  S A IEF  DG I  AN  FL   GY L+E+ G+HH++F 
Sbjct: 123 VTDEKLRAADSNGKLAAIDRSQAVIEFALDGTIQTANQRFLDLTGYRLEELQGRHHRMFL 182

Query: 70  AEYYVNTSEYQQFWRELKQGQAKEGKFPRVHKNGQEIWLRATYFPIKLD--GKITKIMKT 127
            +       Y  FW +L +G+ + G+F R+ K+G ++W++ATY PI LD  GK  KI+K 
Sbjct: 183 DKADAAEPAYAAFWDKLGRGEHQSGEFRRLTKSGAQVWIQATYTPI-LDPTGKPWKIVKF 241

Query: 128 AAVITEDKYQLDAQAALFSALQKSQAIIEFSPEGNILNANANFLRTMGYSKEQLQGKHHR 187
           A  +TE + +     A   A+ +SQA+I F P+G IL+AN NFL+ MGY  +++ G++HR
Sbjct: 242 ATDVTEQRLRNADFRAQIEAINRSQAVIHFKPDGTILDANDNFLKAMGYRLDEVVGQNHR 301

Query: 188 LFCF--DNFYQDNPHFWDDLRRGQYKKGLFQRKNAYGDSIWLEAVYNPVMDDHGKVVKVI 245
           LF         +   FW+ LR G++   L++R+   G  +W+ A YNPV+ + G+V+KV+
Sbjct: 302 LFVSPEQQASAEYSQFWEILRSGKFHTSLYRRRARNGSDVWINASYNPVLSETGEVLKVV 361

Query: 246 KFASDITQRIIKSHAIRDAANIAHATSQSTVEQANRGVQLLDATVNTSNAIAA------- 298
           KFA+D+T  +IKS    +A   +  T Q  +E  +   ++  +    S  I A       
Sbjct: 362 KFATDVT-GMIKSRL--EAIEFSKRTVQKVIEVGDSVERMCGSATQISTDILASRKVVDE 418

Query: 299 ---QTHKTTESMLKLNEQSQSIQAIVATISAIADQTNLLALNAAIEAARAGEQGRGFAVV 355
              +T     +  +LNE + ++  +   I AIA Q  LL+LNA IEAARAGE GRGFAVV
Sbjct: 419 IDRRTSAADSATGRLNEAAAAMDGVAKFIDAIASQIKLLSLNATIEAARAGEAGRGFAVV 478

Query: 356 ADEVRQLAARTSKSTGEIAA-----------VVDKNSQLTASATSMMNEVERIAEEGKQQ 404
           A EV+ LA +TS +T  I             VV+    +  S  S+ + V  +A   ++Q
Sbjct: 479 ATEVKSLAEQTSGATERIGVEIVAMQEVVRQVVEALGGIARSVDSVKSTVHGVAAGAEEQ 538

Query: 405 LA---EVTAVMGDIRTGAENVAETVSQLSI 431
           ++    V A M + R G E +   + ++ I
Sbjct: 539 MSLSDGVAANMREARNGVEAINRNLQEMLI 568



 Score =  205 bits (521), Expect = 3e-57
 Identities = 106/292 (36%), Positives = 173/292 (59%), Gaps = 14/292 (4%)

Query: 22  AVVDSIKASIATIEFTPDGIILDANPLFLKAVGYSLDEIVGKHHKLFCAEYYVNTSEYQQ 81
           A +D++  S A +EFT DG+++DAN +FL A+GYSL+E+ G+HH+ F        ++Y++
Sbjct: 13  AKLDALDKSQAIVEFTMDGVVVDANRIFLDAMGYSLEEVRGQHHRKFVDPVEAGGADYRR 72

Query: 82  FWRELKQGQAKEGKFPRVHKNGQEIWLRATYFPI-KLDGKITKIMKTAAVITEDKYQLDA 140
           FW EL+ G+ +  ++ R+ + G+EIWLRATY P+    G++T ++K A V+T++K +   
Sbjct: 73  FWDELRAGRFQSAEYRRITRFGEEIWLRATYNPVLGASGRVTGVVKFATVVTDEKLRAAD 132

Query: 141 QAALFSALQKSQAIIEFSPEGNILNANANFLRTMGYSKEQLQGKHHRLFCFDNFYQDNP- 199
                +A+ +SQA+IEF+ +G I  AN  FL   GY  E+LQG+HHR+F  D      P 
Sbjct: 133 SNGKLAAIDRSQAVIEFALDGTIQTANQRFLDLTGYRLEELQGRHHRMF-LDKADAAEPA 191

Query: 200 --HFWDDLRRGQYKKGLFQRKNAYGDSIWLEAVYNPVMDDHGKVVKVIKFASDITQRIIK 257
              FWD L RG+++ G F+R    G  +W++A Y P++D  GK  K++KFA+D+T++ ++
Sbjct: 192 YAAFWDKLGRGEHQSGEFRRLTKSGAQVWIQATYTPILDPTGKPWKIVKFATDVTEQRLR 251

Query: 258 S-------HAIRDAANIAHATSQSTVEQANRGVQLLDATVNTSNAIAAQTHK 302
           +        AI  +  + H     T+  AN     L A     + +  Q H+
Sbjct: 252 NADFRAQIEAINRSQAVIHFKPDGTILDAND--NFLKAMGYRLDEVVGQNHR 301



 Score =  103 bits (257), Expect = 1e-26
 Identities = 49/125 (39%), Positives = 78/125 (62%), Gaps = 1/125 (0%)

Query: 9   DLAESETKRREAEAVVDSIKASIATIEFTPDGIILDANPLFLKAVGYSLDEIVGKHHKLF 68
           D+ E   +  +  A +++I  S A I F PDG ILDAN  FLKA+GY LDE+VG++H+LF
Sbjct: 244 DVTEQRLRNADFRAQIEAINRSQAVIHFKPDGTILDANDNFLKAMGYRLDEVVGQNHRLF 303

Query: 69  CAEYYVNTSEYQQFWRELKQGQAKEGKFPRVHKNGQEIWLRATYFPIKLD-GKITKIMKT 127
            +     ++EY QFW  L+ G+     + R  +NG ++W+ A+Y P+  + G++ K++K 
Sbjct: 304 VSPEQQASAEYSQFWEILRSGKFHTSLYRRRARNGSDVWINASYNPVLSETGEVLKVVKF 363

Query: 128 AAVIT 132
           A  +T
Sbjct: 364 ATDVT 368