Pairwise Alignments

Query, 432 a.a., methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq) from Shewanella sp. ANA-3

Subject, 578 a.a., sensory methylation accepting chemotaxis protein from Agrobacterium fabrum C58

 Score =  249 bits (635), Expect = 2e-70
 Identities = 163/495 (32%), Positives = 244/495 (49%), Gaps = 95/495 (19%)

Query: 19  EAEAVVDSIKASIATIEFTPDGIILDANPLFLKAVGYSLDEIVGKHHKLFCAEYYVNTSE 78
           +A AV+D++  S A IEF   G IL AN  F KAVGY   EIVG+ H +F +     + E
Sbjct: 10  DASAVLDALSRSQAIIEFDLTGKILKANDNFCKAVGYQPSEIVGRTHSIFLSSEDAASPE 69

Query: 79  YQQFWRELKQGQAKEGKFPRVHKNGQEIWLRATYFPIKLDGKITKIMKTAAVITEDKYQL 138
           Y+ FW +L +G+  +G++ R  KNG EIW+ A+Y P+   GK  K++K A  IT  K + 
Sbjct: 70  YKAFWAKLSRGEYDQGQYRRQAKNGDEIWIEASYNPVFRFGKPYKVVKIATDITVIKRKS 129

Query: 139 DAQAALFSALQKSQAIIEFSPEGNILNANANFLRTMGYSKEQLQGKHHRLFCFDNF--YQ 196
                  +AL ++QA+IEF+P+G IL AN NFL T+ Y+ E++ GKHH +FC   +   Q
Sbjct: 130 AEDDGKLAALSRAQAMIEFTPDGKILGANENFLTTLDYTAEEIIGKHHSIFCEPAYAQSQ 189

Query: 197 DNPHFWDDLRRGQYKKGLFQRKNAYGDSIWLEAVYNPVMDDHGKVVKVIKFASDITQRII 256
           D   FW +L RG +  G F R       ++++A YNP++DD G+V KV+KFA D+T R+ 
Sbjct: 190 DYRDFWKELGRGHFSTGQFMRLGKDNKRVFIQASYNPIIDDRGRVFKVVKFAFDVTDRV- 248

Query: 257 KSHAIR----------------------------------------------------DA 264
             HA+                                                     D 
Sbjct: 249 --HAVEELGAALERLSQCNIRVTLDKPFVGEFERLRQDFNKSIAEFQKTLENVLGQTGDL 306

Query: 265 ANIAHATSQSTVEQANRGVQLLDATVNTSNA---IAAQTHKTTESMLKLNEQSQSIQA-- 319
              +   S+++V  A R  +   A   TS A   I A    +TE+M +  +  QS +A  
Sbjct: 307 TRSSQEVSEASVNLAERSREQAVALEETSAALEEITATVRSSTENMKETRKLVQSARAST 366

Query: 320 --------------------------IVATISAIADQTNLLALNAAIEAARAGEQGRGFA 353
                                     I+  I  IA QTNLLALNA +EAARAG+ G+GFA
Sbjct: 367 VASTEVVERTVDAMQRIETASREISQIIGVIDEIAFQTNLLALNAGVEAARAGDAGKGFA 426

Query: 354 VVADEVRQLAARTSKSTGEIAAVVDKNSQLTASATSMMNEVERIAEEGKQQLAEVTAVMG 413
           VVA EVR+LA R++ +  EI A+++       S T ++  V  + E G + L ++ +++ 
Sbjct: 427 VVAQEVRELAQRSASAAKEIKALINN------SGTEVLEGVRLVGETG-EALKQIDSLVR 479

Query: 414 DIRTGAENVAETVSQ 428
            I    + +++   +
Sbjct: 480 HIDGNVDTISKAADE 494