Pairwise Alignments

Query, 299 a.a., tyrosine recombinase XerC (RefSeq) from Shewanella sp. ANA-3

Subject, 299 a.a., site-specific tyrosine recombinase XerD from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  174 bits (441), Expect = 2e-48
 Identities = 101/298 (33%), Positives = 173/298 (58%), Gaps = 18/298 (6%)

Query: 9   LQQFETYMQSERQLSAHTVRNYMYELQR--------GSELLPEGVDLLNVGREHWQQVLA 60
           ++QFE Y++ E+ LS H+V  Y  ++++        G ++ PE +    +     +  L 
Sbjct: 7   IKQFEEYLKLEKSLSRHSVEAYERDVRKLVDFMDAKGLQVAPEDMKPAIL-----RDFLE 61

Query: 61  KLHRKGLSPRSLSLWLSAIKQWGEFLLRSGVIELNPAKGLSAPKQAKPLPKNIDVDSISH 120
            ++  G++P S +  LS I+ + +FL+   +++ +P   + APK  + LP  +    I  
Sbjct: 62  WINELGMTPHSQARTLSGIRAFYKFLIMEDMMQTDPTDTIEAPKLDRKLPDTLAFHEIEQ 121

Query: 121 LL-AIEGNDPLTLRDKAIMELFYSSGLRLAELAALDLSSVQYDQHEVRVLGKGNKERIVP 179
           LL AI+ + P   R++A++E  YSSGLR++EL  L +S++  D   +++ GKG KER+VP
Sbjct: 122 LLSAIDLSTPEGTRNRAMLETLYSSGLRVSELLDLRISNLYADAGFLKISGKGEKERLVP 181

Query: 180 VGRYAIEAISAW---LKCRKQISC-EDNALFVTEKGKRLSHRSIQARMSKWGQEQALSMR 235
           +GR A++ I  +   ++C   I    ++ LF+  +G ++S   +   +     +  +   
Sbjct: 182 IGRDALKHIQLYRDGIRCHLNIKKGNEDILFLNRRGAKMSRVMVFTIIKDLTAKAGIQKT 241

Query: 236 VHPHKLRHSFATHMLESSADLRAVQELLGHENLSTTQIYTSLDFQHLAKVYDNAHPRA 293
           V PH  RHSFATH++E  ADLRAVQE+LGHE+++TT+IYT LD  +L +V    HPR+
Sbjct: 242 VSPHTFRHSFATHLIEGGADLRAVQEMLGHESITTTEIYTHLDRDYLKQVIKEFHPRS 299