Pairwise Alignments

Query, 299 a.a., tyrosine recombinase XerC (RefSeq) from Shewanella sp. ANA-3

Subject, 299 a.a., site-specific tyrosine recombinase XerD from Dickeya dianthicola ME23

 Score =  167 bits (424), Expect = 2e-46
 Identities = 106/299 (35%), Positives = 170/299 (56%), Gaps = 6/299 (2%)

Query: 1   MTPQCQSYLQQFETYMQSERQLSAHTVRNYMYELQRGSELLPEG-VDLLNVGREHWQQVL 59
           M  Q Q+ ++QF   +  ER L+ +T+ +Y  +L+  ++ L      LL       Q  L
Sbjct: 1   MQKQDQALIEQFLDALWLERNLAENTLSSYRNDLRSLADWLAHHECSLLQAQPSDLQDFL 60

Query: 60  AKLHRKGLSPRSLSLWLSAIKQWGEFLLRSGVIELNPAKGLSAPKQAKPLPKNIDVDSIS 119
           A+    G    S +  LSA+++  ++L R      +P+  LS+PK  + LPK++    + 
Sbjct: 61  AERLEGGYKATSSARLLSAMRRLFQYLYREKQRTDDPSAPLSSPKLPQRLPKDLTEAQVD 120

Query: 120 HLLAIEGND-PLTLRDKAIMELFYSSGLRLAELAALDLSSVQYDQHEVRVLGKGNKERIV 178
            LLA    D P+ LRDKA++EL Y++GLR++EL  L +S V   Q  VRV+GKGNKER+V
Sbjct: 121 ALLAAPVTDQPIELRDKAMLELLYATGLRVSELVGLTISDVSLRQGVVRVIGKGNKERLV 180

Query: 179 PVGRYAIEAISAWLKCRKQISCED---NALFVTEKGKRLSHRSIQARMSKWGQEQAL-SM 234
           P+G  A+  +  +L+  +         + LF + + ++++ ++   R+  +    ++ S 
Sbjct: 181 PLGEEAVYWLEQYLEYSRPWLLNGQTLDVLFPSNRAQQMTRQTFWHRIKHYATLASIDSN 240

Query: 235 RVHPHKLRHSFATHMLESSADLRAVQELLGHENLSTTQIYTSLDFQHLAKVYDNAHPRA 293
           ++ PH LRH+FATH+L   ADLR VQ LLGH +LSTTQIYT +  + L  ++   HPRA
Sbjct: 241 KLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRLLHQQHHPRA 299