Pairwise Alignments

Query, 414 a.a., diaminopimelate decarboxylase (RefSeq) from Shewanella sp. ANA-3

Subject, 424 a.a., diaminopimelate decarboxylase from Magnetospirillum magneticum AMB-1

 Score =  382 bits (980), Expect = e-110
 Identities = 204/417 (48%), Positives = 268/417 (64%), Gaps = 5/417 (1%)

Query: 1   MDHFLYQDNTLYAEGCRVNDLAQQYGTPLYIYSRATLERHWHAFNNAV--ADHPHLVCYA 58
           M+HF YQ+  L+AE   +  +A++ GTP Y YS ATL+RH+  F  A+  A     +C+A
Sbjct: 1   MNHFHYQNGELFAEDVAIARIAREVGTPFYCYSTATLQRHYTVFAEALKAAGLDATICFA 60

Query: 59  VKANSNLAVLNVLARLGSGFDIVSGGELARVIEAGGDPAKVVFSGVGKTVAEMEQALNLG 118
            KAN N+AV+   A+LG+G D+VS GEL + + AG   A++VFSGVGKT  E+E A+  G
Sbjct: 61  AKANPNMAVIRTFAQLGAGADVVSEGELRQALAAGVPAARIVFSGVGKTRHELEFAVAKG 120

Query: 119 IYCFNVESSAELEQLNDVAGRLGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAMDEA 178
           I+  NVES  ELE L+++A   G+V P+++RVNPDVDAGTH  I+TG KENKFGI    A
Sbjct: 121 IFQINVESEPELEMLSEIAAARGQVMPIAIRVNPDVDAGTHAKITTGKKENKFGIEWTRA 180

Query: 179 EVVFARAHALPHLQVKGVDCHIGSQLTEIQPFLDAMDRMLALIDRLADQGIVIEHFDVGG 238
             V+ARA ALP ++   + CHIGSQLTE+ PF +A  R+  L+  L   GI I   D+GG
Sbjct: 181 REVYARAKALPGVEPVAIACHIGSQLTELTPFREAFLRVRDLVAMLRADGIDIRRLDLGG 240

Query: 239 GLGVTYDDETPPHPDVYAAALLARLGDRKLKLIFEPGRAIAANAGIFVTQVLYLKENSDK 298
           GLGV YDDETPP P  YA  + A LGD   + +FEPGR +  NAGI V++++ +KE S +
Sbjct: 241 GLGVPYDDETPPEPAAYAEVIKATLGDLGCRFVFEPGRLLVGNAGILVSRIIRVKEGSTR 300

Query: 299 RFAIVDGAMNDLIRPALYSAWQNIIPVNPRDEQAQV--FDIVGPVCETGDFLGKDRAL-A 355
            F IVD AMNDL RP+LY A+ +I PV      A +   D+VGPVCETGD   K R L  
Sbjct: 301 TFLIVDAAMNDLARPSLYDAYHSIFPVAEPKAGAALAEVDVVGPVCETGDTFAKQRRLPP 360

Query: 356 IAAGDLLVVRSSGAYGFAMASNYNTRPRAAEVMVDGDKAYLVREREKLAQLWQGEQL 412
           +   DLL   ++GAYG AM+S YNTRP   EV+V G    ++R R     +   E L
Sbjct: 361 MRTDDLLAFGTAGAYGAAMSSTYNTRPLIPEVLVKGGDYAVIRVRPSYEDMRSLESL 417