Pairwise Alignments

Query, 414 a.a., diaminopimelate decarboxylase (RefSeq) from Shewanella sp. ANA-3

Subject, 424 a.a., diaminopimelate decarboxylase from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  351 bits (901), Expect = e-101
 Identities = 191/418 (45%), Positives = 266/418 (63%), Gaps = 8/418 (1%)

Query: 1   MDHFLYQDNTLYAEGCRVNDLAQQYGTPLYIYSRATLERHWHAFNNAVADHPH-----LV 55
           M HF  +D  L+AEG  +  +A + GTP Y+YS ATL+RH+     A   H       L+
Sbjct: 1   MHHFDLKDGALHAEGVPLELIADEVGTPTYVYSTATLKRHYGLLRAAADAHRDALGEALI 60

Query: 56  CYAVKANSNLAVLNVLARLGSGFDIVSGGELARVIEAGGDPAKVVFSGVGKTVAEMEQAL 115
            +AVKANSNL+VL  LA+LGSG D VS GE+ R + AG    +++FSGVGKT  EM  A+
Sbjct: 61  AFAVKANSNLSVLATLAKLGSGADTVSEGEIRRALAAGVPSDRIIFSGVGKTDVEMAFAI 120

Query: 116 NLGIYCFNVESSAELEQLNDVAGRLGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAM 175
           ++G+   NVES AEL++L  VA  +     +++RVNP+V AG H  I+TG K +KFG+ +
Sbjct: 121 SVGVRQINVESGAELDRLIAVAAMMDASPAIAVRVNPNVGAGGHAKITTGGKGDKFGVPV 180

Query: 176 DEAEVVFARAHALPHLQVKGVDCHIGSQLTEIQPFLDAMDRMLALIDRLADQGIVIEHFD 235
           +EA  ++A A A PH+   G+ CHIGSQ+T++ P   A + +  +  +L  QG  +   D
Sbjct: 181 EEAMDLYAHASASPHVTPVGLACHIGSQITDLTPLEAAFEVLADMTRKLRAQGHAVTRLD 240

Query: 236 VGGGLGVTYDDET-PPHPDVYAAALLARLGDRKLKLIFEPGRAIAANAGIFVTQVLYLKE 294
           +GGGLGV Y   T PP P  Y A     L    ++  FEPGR +AANAG+ ++QV+ + E
Sbjct: 241 LGGGLGVPYSGGTEPPSPAEYVAMAARVLNGLDVEAAFEPGRLLAANAGVLLSQVIQVNE 300

Query: 295 NSD-KRFAIVDGAMNDLIRPALYSAWQNIIPVNPRDEQAQVFDIVGPVCETGDFLGKDRA 353
            SD +RF ++D AMNDL+RPALY A+ +I PVNPR+  A  +D+VGPVCETGD   +DRA
Sbjct: 301 RSDGRRFLVLDAAMNDLMRPALYDAFHDIQPVNPREGGATSYDVVGPVCETGDTFARDRA 360

Query: 354 L-AIAAGDLLVVRSSGAYGFAMASNYNTRPRAAEVMVDGDKAYLVREREKLAQLWQGE 410
           L  + A DL+V   +GAYG  M+S YN+RP   EV+VDGD+  ++R R    ++   E
Sbjct: 361 LPPLEAEDLIVFTGAGAYGAVMSSEYNSRPLIPEVLVDGDQWAVIRPRPTYEEMLDRE 418