Pairwise Alignments

Query, 876 a.a., diguanylate cyclase/phosphodiesterase with GAF sensor (RefSeq) from Shewanella sp. ANA-3

Subject, 1098 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  223 bits (568), Expect = 5e-62
 Identities = 133/432 (30%), Positives = 227/432 (52%), Gaps = 10/432 (2%)

Query: 436  KEIRQRRNMEAKLVHDAKHDALTGLPNRAMFMERLNQAIKHVRRHSLEQFALLFIDLDRF 495
            +++   +N +A++ H A HD LT LPNRA+ M+RL+Q I  ++RH+L   ALLF+DLD F
Sbjct: 645  RDVSLLKNAQAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRG-ALLFLDLDHF 703

Query: 496  KQINDTMGHLEGDRFLIETATRLRACIRSNDTLARLGGDEFVILLDSINGI-----NDAR 550
            K IND++GH  GD  L     RL A +R  DT+ARLGGDEFV+LL  ++G      N  +
Sbjct: 704  KHINDSLGHPVGDTVLKIVTARLEASVRMEDTVARLGGDEFVVLLSGLDGTRTEVSNQVQ 763

Query: 551  DVAERVIQKISLSYTLGAIEFHSGASIGITISGNKLDTSESMLRNADTAMYQAKANGKGC 610
            ++A+ + + +S    L         SIG+ +  +   T   +L+ AD A+Y+AK +G+  
Sbjct: 764  ELADTLRELLSEPMFLDGHRLQVTPSIGVALIPDHGSTPADLLKRADIALYRAKDSGRNT 823

Query: 611  YVIFDDSASQQKMQDIAFENDFKQALQTGELQLQFWPIVDLQTQQTQALECRLTWEHPQW 670
              +F +S  +   + +  E D + AL  GE  + + P VD +  +    E  + W+HPQ 
Sbjct: 824  TQMFHNSMQKTASERLRMETDLRLALSRGEFSVHYQPQVDARGNRIVGAEALVRWQHPQL 883

Query: 671  GTIPQEILSQLAEQANLMVELDKYTISLLDKSYHQLLAN---QGDKVELHLMLSSQHLKH 727
            G        ++ E + L++E+  + +     ++ QL+A          L + +S +  + 
Sbjct: 884  GAQSPSEFIKVLEDSGLILEVGTWILDEACAAFQQLIAEGLVDPLNFSLCVNISPRQFRQ 943

Query: 728  KHALRGLKNALKQTKLALPQLWLFFNEKALVLETENHINGFELLKKLDVNLGISHYGSGH 787
               +  ++ +LKQ KL    L L   E  ++   ++ I+    LKKL V+  +  +G+G+
Sbjct: 944  NDFVERVERSLKQHKLPFSLLKLEITEGIVIQNLDDTISKMRRLKKLGVSFAMDDFGTGY 1003

Query: 788  SSLNSLLFLPIKGLKLDANITKQ-LQDEQHIKLMSAYQKAASTLDLQTFVDGLQSAEQIK 846
            SSL  L  LP+  LK+D +  +    D    +++ A    A +L+L+   +G+++ +Q+ 
Sbjct: 1004 SSLTYLKRLPVDALKIDQSFVRDATHDPNDAEIIRAIVAMARSLNLEVIAEGVETQDQLA 1063

Query: 847  IFHALGYRFGQG 858
                LG    QG
Sbjct: 1064 FLQGLGCHLYQG 1075