Pairwise Alignments

Query, 876 a.a., diguanylate cyclase/phosphodiesterase with GAF sensor (RefSeq) from Shewanella sp. ANA-3

Subject, 1247 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  233 bits (594), Expect = 5e-65
 Identities = 148/462 (32%), Positives = 237/462 (51%), Gaps = 14/462 (3%)

Query: 404  LTAESLRRSYEELEEKVAARTTALAELNKDLEKEIRQRRNMEAKLVHDAKHDALTGLPNR 463
            LT  ++R S  E+   VA               +I   ++ +AKL + A HD LTGLPNR
Sbjct: 771  LTISAVRNSDREITHFVAVFA------------DISSIKHAQAKLDYQAHHDPLTGLPNR 818

Query: 464  AMFMERLNQAIKHVRRHSLEQFALLFIDLDRFKQINDTMGHLEGDRFLIETATRLRACIR 523
             +F  RL Q +    + S  Q A+LF+DLDRFK IND++GH  GD  L   A RL+  +R
Sbjct: 819  TLFENRL-QGVLTCAQVSNRQGAVLFLDLDRFKHINDSLGHPVGDLLLKGIAQRLKEQVR 877

Query: 524  SNDTLARLGGDEFVILLDSINGINDARDVAERVIQKISLSYTLGAIEFHSGASIGITISG 583
              DT+ARLGGDEF+ILL  ++  +DA  +A +++   +  +  G  EF + ASIGI++  
Sbjct: 878  DVDTVARLGGDEFIILLPGLHKPSDASTIANKLLACFNAPFQAGEHEFFTSASIGISLYP 937

Query: 584  NKLDTSESMLRNADTAMYQAKANGKGCYVIFDDSASQQKMQDIAFENDFKQALQTGELQL 643
                   +++RNAD AMY++KA G+     +    + Q  + IA E++ ++A++  E+ L
Sbjct: 938  QDGTDVSTLIRNADAAMYRSKAKGRNRVEAYTRDLTAQASERIALEHELRRAVERNEMSL 997

Query: 644  QFWPIVDLQTQQTQALECRLTWEHPQWGTIPQEILSQLAEQANLMVELDKYTISLLDKSY 703
             F P + L+TQ     E  + W HP +G +P E    LAE+   +++L  + +    +  
Sbjct: 998  CFQPKLSLKTQSLVGAEALIRWSHPTFGEVPPEHFIHLAEENGTILQLGDWVLEQACRQM 1057

Query: 704  HQLLANQGDKVELHLMLSSQHLKHKHALRGLKNALKQTKLALPQLWLFFNEKALVLETEN 763
                 +      L + L+   L+H H  R ++  LK  +L    L L   E  ++ + E 
Sbjct: 1058 QAWKQHYQPFGPLSINLAGAQLRHPHLARRIEQLLKHHQLKAGDLQLEITENFIMSQAEE 1117

Query: 764  HINGFELLKKLDVNLGISHYGSGHSSLNSLLFLPIKGLKLDANITKQLQDEQH-IKLMSA 822
             +     LKKL V L I  +G+G+SSL+ L  LP+  LK+D +  + L D+ H   +  A
Sbjct: 1118 ALAVLYQLKKLGVQLAIDDFGTGYSSLSYLKRLPLDILKIDKSFIRGLPDDPHDAAIARA 1177

Query: 823  YQKAASTLDLQTFVDGLQSAEQIKIFHALGYRFGQGGALASP 864
                  ++ L    +G+++  Q +   A G    QG  ++ P
Sbjct: 1178 IIALGRSMQLTIIAEGVENQAQQRFLAAEGCEQIQGYIVSLP 1219