Pairwise Alignments

Query, 839 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

Subject, 830 a.a., Predicted exporters of the RND superfamily from Kangiella aquimarina DSM 16071

 Score = 68.6 bits (166), Expect = 1e-15
 Identities = 122/607 (20%), Positives = 248/607 (40%), Gaps = 94/607 (15%)

Query: 277 EISVLGLASLLGVVLLVWLAFRSV----MPLLLAMVTIG--SGLLLAVTFTLSVFGELHL 330
           +I+V G+  LL ++L +++ F  V    +PL   +VT+   +GLL  + + ++V      
Sbjct: 264 DITVFGIGILLFIMLALFVFFGKVRWVLIPLFSCLVTVLVLAGLLSYLDWRITV------ 317

Query: 331 LTLVFGTSLIGIAIDYSFH---FYCERLSDHQRSAQ-----ATVAYIFPTVSLAFITSAL 382
           ++  F + L+   +  + H   FY + +SD+  S+Q     AT+  ++       +T+ +
Sbjct: 318 ISSNFPSILLITVLALNVHLVVFYRDFISDNPDSSQMERLKATIKTMYWPCLYTALTTIV 377

Query: 383 AYVGIGLAPFPGMQQVAIFCASGLLGAYLTLVLAYP----LLAGSKLPSGERPLNLAQAY 438
           A++ + ++    +         GL+  ++   + +P    LL+  K  SG        + 
Sbjct: 378 AFISLLISGIRPVIDFGWIMTIGLVLGFVITFIVFPSFIQLLSTEKHQSGS-------SI 430

Query: 439 LAKLTGFSNKLISPWGLSLFALVLAGVCL--LGISKLNVDDDIRHLQQSPASVTEPEDKL 496
             K+T +   +   +  ++F L +  V     GIS+L V++      +    + +    +
Sbjct: 431 TYKITHWIYNISVKFKPAIFTLAVLLVLFSGYGISQLKVENRFIDYFKPSTEIYQGMTVI 490

Query: 497 RKLLSGGTDNQFLLVRAPSEEALLQRLEALSPQLDAAIKQQELGNYISLSRYLP----SK 552
            + L G T    ++   P+EE+L    E           + E G+    S Y P    ++
Sbjct: 491 DQELGGTTPLDIVIDADPNEESLFADDEF----------EDEFGDEFDSSTYDPGYWYTR 540

Query: 553 QKQDAAYQLQSKIYQSQLTTVLNSIG--------LDDGLAPELSATYLAAKDSYITPTDF 604
            K +   Q+   I   ++T  + S+         +++G  P+     L  K+    P D 
Sbjct: 541 SKLETLEQIHDYIDSLEVTGKVQSLATTTKVLKEMNEGEYPDELTLSLVHKEM---PDD- 596

Query: 605 FELGLGKQLAPLWLAPQGFAPLGHSTESATSPDNANLGNDSHGTIVLLGGIEDIAALKAR 664
               +   L   +L+  G     +     T+P+             L+  I D  A +  
Sbjct: 597 ----VRATLLDPYLSEDGDQTRINIRVEETNPELKRSD--------LIANINDFIANETN 644

Query: 665 FVEDPLVQLIDKVADISTVMGHYRLLTLKLLGLALVIALLLFSLSFGVKRAALVVAVP-A 723
            V+   V     +   + ++       +  +G+  +  LL+F + F     A++  +P A
Sbjct: 645 -VKQEHVHFTGMMVLYNNMLQSLFDSQIMTIGVVYLAILLMFLVLFRSFVLAILATIPNA 703

Query: 724 LAALLTLAILGLAGSPLSLFHALALILVFGIGIDYSLFFASAAQ---------------- 767
           L+A L L I+G  G P+ +       +V GI +D S+ +    +                
Sbjct: 704 LSAALVLGIMGWMGVPMDMMTITIAAIVIGIAVDNSIHYVHRFKNEFKKDNDYLATMERC 763

Query: 768 HGKAVMMAVFMSACSTLLAFGLLAFSQTQAIHYFGL----TLSLGIGFTFVLSPLILTTS 823
           HG ++  A++ +  + ++ F +LA S+     YFGL     +++ +     L PL+L T 
Sbjct: 764 HG-SIGKAIYYTGVTIIVGFAILALSEFIPSIYFGLLTGFAMAVALFLNLTLLPLMLVTV 822

Query: 824 QVLTTNK 830
           + L  NK
Sbjct: 823 KPLKANK 829



 Score = 34.7 bits (78), Expect = 2e-05
 Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 5/77 (6%)

Query: 276 SEISVLGLASLLGVVLLVWLAFRSVMPLLLAMV--TIGSGLLLAVTFTLSVFGELHLLTL 333
           S+I  +G+   L ++L+  + FRS +  +LA +   + + L+L +   + V   + ++T+
Sbjct: 669 SQIMTIGVV-YLAILLMFLVLFRSFVLAILATIPNALSAALVLGIMGWMGV--PMDMMTI 725

Query: 334 VFGTSLIGIAIDYSFHF 350
                +IGIA+D S H+
Sbjct: 726 TIAAIVIGIAVDNSIHY 742