Pairwise Alignments

Query, 839 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

Subject, 837 a.a., Predicted exporters of the RND superfamily from Kangiella aquimarina DSM 16071

 Score = 55.5 bits (132), Expect = 1e-11
 Identities = 57/276 (20%), Positives = 124/276 (44%), Gaps = 33/276 (11%)

Query: 283 LASLLGVVLLVWLAFRS----VMPLLLAMVT--IGSGLLLAVTFTLSVFGELHLLTLVFG 336
           LA+L+ + +L+W+ FR+      P+++AM T  I  GLL+ + FT+      H+++ +  
Sbjct: 222 LAALV-IFILMWVFFRNFKFIAAPMIIAMATVIITMGLLIGMGFTV------HIMSSMIP 274

Query: 337 TSLIGIAIDYSFHFYCERLS------DHQRSAQATVAYIFPTVSLAFITSALAYVGIGLA 390
             L+ IA+  S H   E         D +   +  + ++F  +    ITSA+ +  + L 
Sbjct: 275 IFLMPIAVVDSIHIMSEFADSYKPGRDRKEVIKEVIGHLFTPMLYTSITSAVGFFSLLLT 334

Query: 391 PFPGMQQVAIFCASGLLGAYLTLVLAYPLLAGSKLPSGERPLNLAQAYLAKLTGFSNKLI 450
           P P +Q    +   G+L A++  ++  P    +  P     L       AK  G   K++
Sbjct: 335 PIPPVQIFGAYVGFGILLAFILTIIFIPAYLIALKPKSLESLQSE----AKQEGTLQKVL 390

Query: 451 SPWG---------LSLFALVLAGVCLLGISKLNVDDDIRHLQQSPASVTEPEDKLRKLLS 501
              G         +++F + +  + + GI+++ ++D+     ++   +    D++     
Sbjct: 391 KKVGKGSLAASKLVTVFFVAVVALSVWGITQIQINDNPVRWFKADHEI-RVADRVLNDHF 449

Query: 502 GGTDNQFLLVRAPSEEALLQRLEALSPQLDAAIKQQ 537
            GT + +L++ A   +A    ++++    D  +K +
Sbjct: 450 AGTYDAYLVLEADESKAKDNWMKSVQAIEDNTLKSE 485



 Score = 33.1 bits (74), Expect = 7e-05
 Identities = 34/141 (24%), Positives = 67/141 (47%), Gaps = 9/141 (6%)

Query: 283 LASLLGVVLLVWLAFRSVMPLLLAMVTIGSGLLLAVTFTLSVFGELHLLTLVFGTSLIGI 342
           +++ + V++++ + FRS++  LLAM+ +   +L        V  +  +   V  +  +G+
Sbjct: 683 MSAFVVVLVMMIVLFRSILFGLLAMLPLSITILFIYGLIGWVGKDYDMPIAVLSSLTLGL 742

Query: 343 AIDYSFHFYCERLSDHQRSA---QATVAYIF----PTVSLAFITSALAYVGIGLAPFPGM 395
           +ID++ HF  ER  D  +     + T+  +F      +S   I  A+ +  +  AP    
Sbjct: 743 SIDFAIHF-LERARDIFKQTGDFKQTMVKMFEEPASAISRNAIVIAIGFTPLLFAPLVPY 801

Query: 396 QQVAIFCASGL-LGAYLTLVL 415
             V  F A+ +   A +TLVL
Sbjct: 802 ITVGFFLATIMAASAVVTLVL 822