Pairwise Alignments

Query, 446 a.a., preprotein translocase subunit SecY (RefSeq) from Shewanella sp. ANA-3

Subject, 442 a.a., preprotein translocase subunit SecY from Pseudomonas simiae WCS417

 Score =  593 bits (1529), Expect = e-174
 Identities = 293/435 (67%), Positives = 361/435 (82%), Gaps = 2/435 (0%)

Query: 1   MAKPGLDLKSAKGGLSELKARLLFVIGAIIVFRAGSFVPIPGIDAAVLAELFAQQKGTIL 60
           MAK G      KGG+SEL ARL F+  AIIV+R G+ +P+PGI+   LA+LF Q +GTIL
Sbjct: 1   MAKQGALSALGKGGMSELWARLRFLFLAIIVYRIGAHIPVPGINPDRLADLFRQNEGTIL 60

Query: 61  GMFNMFSGGALSRASIFALGIMPYISASIIMQLLTVVHPALAELKKEGESGRKKISQYTR 120
            +FNMFSGGAL R SIFALGIMPYISASIIMQL+T V P L +LKKEGE+GR+KISQYTR
Sbjct: 61  SLFNMFSGGALERMSIFALGIMPYISASIIMQLMTAVSPQLEQLKKEGEAGRRKISQYTR 120

Query: 121 WGTLVLGTFQSIGIATGLPNLVPGLVVNIGFGFYFVAVVSLVTGTMFLMWLGEQITERGI 180
           +GT+VL   Q+IG++ GL     G+     FGF+FVAV + V G MF+MWLGEQITERG+
Sbjct: 121 YGTVVLALVQAIGMSVGLAG--QGVAFTGDFGFHFVAVSTFVAGAMFMMWLGEQITERGV 178

Query: 181 GNGISILIFAGIVAGLPSAIGQTAEQARQGDLNVLVLLLLAVIIFAVTYFVVFVERGQRR 240
           GNGIS+LIFAGIVAGLP AIGQ+ E ARQGD+N+  L+ + ++  A+  FVVF+ERGQRR
Sbjct: 179 GNGISMLIFAGIVAGLPRAIGQSFESARQGDINIFALVAIGLLAVAIIGFVVFIERGQRR 238

Query: 241 IVVNYAKRQQGRKVFAAQSTHLPLKINMAGVIPPIFASSIILFPGTLAQWFGQNESMSWL 300
           I V+YAKRQQGRKVFAAQ++HLPLK+NMAGVIP IFASSI+LFP +L  WFGQ+E+M WL
Sbjct: 239 IAVHYAKRQQGRKVFAAQTSHLPLKVNMAGVIPAIFASSILLFPASLGTWFGQSENMGWL 298

Query: 301 SDFSLAVSPGQPLYSLLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQTS 360
            D S +++PGQPL  LL++A IIFFCFFYTAL+FNP++ A+NLKKSGAFIPGIRPGEQ++
Sbjct: 299 QDLSQSIAPGQPLNILLFSAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSA 358

Query: 361 RYIDKVMTRLTLAGALYITFICLIPEFMLIAWKVQFYFGGTSLLIMVVVIMDFMAQVQTH 420
           RYID V+TRLTL GALY+T +CL+P+F+++A  V FY GGTSLLI+VVV+MDFM+QVQ+H
Sbjct: 359 RYIDGVLTRLTLFGALYMTAVCLLPQFLVVAANVPFYLGGTSLLIVVVVVMDFMSQVQSH 418

Query: 421 MMSHQYESVMKKANL 435
           ++SHQYES+MKKANL
Sbjct: 419 LVSHQYESLMKKANL 433