Pairwise Alignments

Query, 446 a.a., preprotein translocase subunit SecY (RefSeq) from Shewanella sp. ANA-3

Subject, 437 a.a., Preprotein translocase secY subunit (TC 3.A.5.1.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  578 bits (1490), Expect = e-169
 Identities = 285/422 (67%), Positives = 346/422 (81%), Gaps = 1/422 (0%)

Query: 13  GGLSELKARLLFVIGAIIVFRAGSFVPIPGIDAAVLAELFAQQKGTILGMFNMFSGGALS 72
           G   +L+ RL+F++ A++V+R G+ +P+PGID A LA+LF  Q+G IL +FNMFSGGALS
Sbjct: 12  GKFGDLRRRLVFLLLALVVYRIGAHIPVPGIDPAQLAQLFQGQQGGILSLFNMFSGGALS 71

Query: 73  RASIFALGIMPYISASIIMQLLTVVHPALAELKKEGESGRKKISQYTRWGTLVLGTFQSI 132
           R ++FALGIMPYISASIIMQL+T V P   +LKKEGE+GR+KI+QYTR+GTL L  FQ++
Sbjct: 72  RFTVFALGIMPYISASIIMQLMTYVVPTFEQLKKEGEAGRRKITQYTRYGTLALAIFQAM 131

Query: 133 GIATGLPNLVPGLVVNIGFGFYFVAVVSLVTGTMFLMWLGEQITERGIGNGISILIFAGI 192
           GIA  L    PGLV++ G GF   AVVSLV GTMFLMWLGEQITERG+GNGISILIFAGI
Sbjct: 132 GIALALEGS-PGLVIDPGMGFRLTAVVSLVAGTMFLMWLGEQITERGLGNGISILIFAGI 190

Query: 193 VAGLPSAIGQTAEQARQGDLNVLVLLLLAVIIFAVTYFVVFVERGQRRIVVNYAKRQQGR 252
            AGLPSAIG   E  R G +N+LV + +  ++  VTYFVVFVERGQR+I+VNYA+RQ G 
Sbjct: 191 AAGLPSAIGGLLELVRTGAMNILVSIFIIALVILVTYFVVFVERGQRKILVNYARRQVGN 250

Query: 253 KVFAAQSTHLPLKINMAGVIPPIFASSIILFPGTLAQWFGQNESMSWLSDFSLAVSPGQP 312
           KV+  QS+HLPLK+NMAGVIPPIFASSIIL P T+  W    +S  WL D + A+SPGQP
Sbjct: 251 KVYGGQSSHLPLKLNMAGVIPPIFASSIILLPTTVVSWVSTGDSTRWLRDIASALSPGQP 310

Query: 313 LYSLLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQTSRYIDKVMTRLTL 372
           +Y  LYAAAI+FFCFFYTALVFN RETADNLKKSGAFIPGIRPG+QT+RYIDK++ RLTL
Sbjct: 311 IYVALYAAAIVFFCFFYTALVFNSRETADNLKKSGAFIPGIRPGDQTARYIDKILLRLTL 370

Query: 373 AGALYITFICLIPEFMLIAWKVQFYFGGTSLLIMVVVIMDFMAQVQTHMMSHQYESVMKK 432
           AGA+YIT +CL+PEF+++ + V FYFGGTSLLI+VVV MDFMAQVQ +MMS QYES++KK
Sbjct: 371 AGAVYITAVCLLPEFLILKYNVPFYFGGTSLLIIVVVTMDFMAQVQNYMMSQQYESLLKK 430

Query: 433 AN 434
           A+
Sbjct: 431 AS 432