Pairwise Alignments

Query, 446 a.a., preprotein translocase subunit SecY (RefSeq) from Shewanella sp. ANA-3

Subject, 443 a.a., preprotein translocase membrane subunit from Escherichia coli BL21

 Score =  706 bits (1823), Expect = 0.0
 Identities = 363/438 (82%), Positives = 395/438 (90%), Gaps = 3/438 (0%)

Query: 1   MAK-PGLDLKSAKGGLSELKARLLFVIGAIIVFRAGSFVPIPGIDAAVLAELFAQQKGTI 59
           MAK PGLD +SAKGGL ELK RLLFVIGA+IVFR GSF+PIPGIDAAVLA+L  QQ+GTI
Sbjct: 1   MAKQPGLDFQSAKGGLGELKRRLLFVIGALIVFRIGSFIPIPGIDAAVLAKLLEQQRGTI 60

Query: 60  LGMFNMFSGGALSRASIFALGIMPYISASIIMQLLTVVHPALAELKKEGESGRKKISQYT 119
           + MFNMFSGGALSRASIFALGIMPYISASII+QLLTVVHP LAE+KKEGESGR+KISQYT
Sbjct: 61  IEMFNMFSGGALSRASIFALGIMPYISASIIIQLLTVVHPTLAEIKKEGESGRRKISQYT 120

Query: 120 RWGTLVLGTFQSIGIATGLPNL--VPGLVVNIGFGFYFVAVVSLVTGTMFLMWLGEQITE 177
           R+GTLVL  FQSIGIATGLPN+  + GLV+N GF FYF AVVSLVTGTMFLMWLGEQITE
Sbjct: 121 RYGTLVLAIFQSIGIATGLPNMPGMQGLVINPGFAFYFTAVVSLVTGTMFLMWLGEQITE 180

Query: 178 RGIGNGISILIFAGIVAGLPSAIGQTAEQARQGDLNVLVLLLLAVIIFAVTYFVVFVERG 237
           RGIGNGISI+IFAGIVAGLP AI  T EQARQGDL+ LVLLL+AV++FAVT+FVVFVERG
Sbjct: 181 RGIGNGISIIIFAGIVAGLPPAIAHTIEQARQGDLHFLVLLLVAVLVFAVTFFVVFVERG 240

Query: 238 QRRIVVNYAKRQQGRKVFAAQSTHLPLKINMAGVIPPIFASSIILFPGTLAQWFGQNESM 297
           QRRIVVNYAKRQQGR+V+AAQSTHLPLK+NMAGVIP IFASSIILFP T+A WFG     
Sbjct: 241 QRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIPAIFASSIILFPATIASWFGGGTGW 300

Query: 298 SWLSDFSLAVSPGQPLYSLLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGE 357
           +WL+  SL + PGQPLY LLYA+AIIFFCFFYTALVFNPRETADNLKKSGAF+PGIRPGE
Sbjct: 301 NWLTTISLYLQPGQPLYVLLYASAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGE 360

Query: 358 QTSRYIDKVMTRLTLAGALYITFICLIPEFMLIAWKVQFYFGGTSLLIMVVVIMDFMAQV 417
           QT++YIDKVMTRLTL GALYITFICLIPEFM  A KV FYFGGTSLLI+VVVIMDFMAQV
Sbjct: 361 QTAKYIDKVMTRLTLVGALYITFICLIPEFMRDAMKVPFYFGGTSLLIVVVVIMDFMAQV 420

Query: 418 QTHMMSHQYESVMKKANL 435
           QT MMS QYES +KKANL
Sbjct: 421 QTLMMSSQYESALKKANL 438