Pairwise Alignments

Query, 168 a.a., peptide deformylase (RefSeq) from Shewanella sp. ANA-3

Subject, 170 a.a., polypeptide deformylase from Agrobacterium fabrum C58

 Score =  143 bits (361), Expect = 1e-39
 Identities = 77/167 (46%), Positives = 107/167 (64%), Gaps = 3/167 (1%)

Query: 1   MALLKVLRFPDERLRTQATPVTEFTAELQTQIDDMFETMYQEKGIGLAATQVDYHKQLIV 60
           M +  ++  PD  LR Q+  + +  AE+    DDM ETMY   GIGLAA Q+   ++++V
Sbjct: 1   MTIKPLIILPDPVLRQQSKLIEQVDAEVLRLADDMLETMYDAPGIGLAAIQIGVPRRMLV 60

Query: 61  MDL--QDEVDRPKVFINPEIIASSGDFCN-EEGCLSVPGIYAKVDRAEFVTVKALDRHGN 117
           +D+  + E   P VFINPEI+  S D    EEGCLS+P  YA+V+R   +TV+ + R G 
Sbjct: 61  IDVAREGEEKTPVVFINPEILKVSDDISTYEEGCLSIPDYYAEVERPASLTVQYVGRDGK 120

Query: 118 EFTVEADELFAICIQHEMDHLKGKLFVDYLSPLKRQRIKQKLEKAAR 164
           + TVEAD L A C+QHE+DHL G LF+D++S LKR  + +K  KAAR
Sbjct: 121 QQTVEADGLLATCLQHEIDHLNGVLFIDHISRLKRDMVIKKFTKAAR 167