Pairwise Alignments

Query, 491 a.a., sensor kinase CusS (RefSeq) from Shewanella sp. ANA-3

Subject, 469 a.a., copper sensor protein from Pseudomonas putida KT2440

 Score =  267 bits (682), Expect = 7e-76
 Identities = 161/473 (34%), Positives = 261/473 (55%), Gaps = 31/473 (6%)

Query: 12  LSLRLTFFISLSTILAFIAFTWFMLHSVENHFAEQDVSDLQQISTTLNRIL--QSPEDPD 69
           L+L + F +    ++A I+F     H    HF   D   L +   +   IL  Q+P    
Sbjct: 12  LTLMIMFAVIAVLVVAGISFNMLSQH----HFRMLDEQALSEKLESTRHILSIQAPGTGM 67

Query: 70  EKKVSKIKESIASYRNVALLLLNPRGEVLFSSAQGAALRPAVNSADFSEHSHARDVFLWT 129
           E+   +++  + +++++   +L   GEVLFS  +   +      AD  E        +W 
Sbjct: 68  EELRPQLRALLGAHQDLTAEILTSEGEVLFSDLKAVQIPDKYKRADKEE--------MWE 119

Query: 130 VEDPARPMDTGSEMKMETYRIIASSGQAIFQGKQQNYVMLTGLSINFHLHYLDALKKNLI 189
            +D             E++     +     QG+     ++  L I  H H+ + L++   
Sbjct: 120 WQD-------------ESHNFRGITTDVEIQGQPAPGTVMLMLDITSHAHFFETLQR-WF 165

Query: 190 AIAVVISLLIVLIIR-IAVRQGHLPLRNVSNAIKSITSENLDTRLEPTRVPIELEQLVIS 248
           AI +VIS L+   I  +  + G  P+  ++    SI++ +L  R+    VP+EL+ L++S
Sbjct: 166 AIGLVISALVSAGIGWLVAKSGLRPVEQITKVATSISARSLQERIPLEPVPLELQTLILS 225

Query: 249 FNHMIGKIEDVFTRQANFSADIAHEIRTPITNLVTQTEIALSQDRTQKELEDVLYSSLEE 308
           FN M+ ++ED F R +NFSADIAHE+RTP++NL+T TE+ L++ R     E+ LYS+LE+
Sbjct: 226 FNGMLARLEDAFVRLSNFSADIAHELRTPVSNLLTHTEVVLTRKRDVDAYEENLYSNLED 285

Query: 309 YNRMTKMVSDMLFLAQADNNQLIPDRVRFDLRAEVMKVFEFFEAWAEERNITLKFNGMPC 368
             RM++M+ DMLFLA++DN  +IP++V   L   V K+FE+++  A++R I L   G   
Sbjct: 286 LKRMSRMIDDMLFLAKSDNGLIIPEQVDIQLHDLVSKLFEYYQLLADDRGIRLTLQGKG- 344

Query: 369 LVEGDPQMFRRAINNLLSNALRYTPEGQAITVSIREQESFFDLVIENPGKPIPEEHLSRL 428
           ++ GD  M  RA++N+LSNA+RYTP+G  I+V I++      L I+N G  I  +H++++
Sbjct: 345 VISGDRLMIDRAVSNILSNAVRYTPDGSGISVEIQQAADKVTLTIKNGGATIDPQHINKI 404

Query: 429 FDRFYRVDPSRQRKG-EGSGIGLAIVKSIVEAHHGRVQVESDVRSTRFILSVP 480
           FDRFYR DP+R+  G   +G+GLAI +SIV+AH G+V   S    T F    P
Sbjct: 405 FDRFYRADPARREGGPSNAGLGLAITRSIVKAHDGKVWCTSSEGVTAFNFIFP 457