Pairwise Alignments

Query, 491 a.a., sensor kinase CusS (RefSeq) from Shewanella sp. ANA-3

Subject, 450 a.a., Sensor histidine kinase from Pseudomonas putida KT2440

 Score =  223 bits (568), Expect = 1e-62
 Identities = 150/471 (31%), Positives = 239/471 (50%), Gaps = 36/471 (7%)

Query: 11  SLSLRLTFFISLSTILAFIAFTWFMLHSVENHFAEQDVSDLQQISTTLNRILQSPEDPDE 70
           SL  RL    +  T    +        + E HF E D   L    +     L      DE
Sbjct: 6   SLGSRLALLFAACTATVSLGAGLLFSRASEQHFVELDQQLLDSRLSLFRTQLAGVSTADE 65

Query: 71  --KKVSKIKESIASYRNVALLLLNPRGEVLFSSAQGAALRPAVNSADFSEHSHARDVFLW 128
              ++  +++ ++   ++AL +    G   F S  G    P    A      HA  +   
Sbjct: 66  LQARLPALRDELSHQADLALRISASNGATWFESRSGL---PHAAQATGLATLHAPGIDYR 122

Query: 129 TVEDPARPMDTGSEMKMETYRIIASSGQAIFQGKQQNYVMLTGLSINFHLHYLDALKKNL 188
           ++  P                        + QG  Q+  +   L I  H H+L  +++ L
Sbjct: 123 SLSVP------------------------LTQGAMQSPRLTLYLDITHHQHFLQGMQR-L 157

Query: 189 IAIAVVISLLIVLIIRI-AVRQGHLPLRNVSNAIKSITSENLDTRLEPTRVPIELEQLVI 247
           I + V +S LI  ++   A R G  PLR +     S+++ +L TRL   ++P EL +L  
Sbjct: 158 IWLTVGLSALITALLGAWAARSGLRPLRQMGQVAASVSARSLTTRLPVAQMPEELAELAS 217

Query: 248 SFNHMIGKIEDVFTRQANFSADIAHEIRTPITNLVTQTEIALSQDRTQKELEDVLYSSLE 307
           S N M+ +++D F R + FSADIAHE+RTP++NL+T T++ L++ R+ +E  + L+ +LE
Sbjct: 218 SMNAMLQRLDDAFQRLSAFSADIAHELRTPLSNLLTHTQVTLTRPRSLEEYREALHGNLE 277

Query: 308 EYNRMTKMVSDMLFLAQADNNQLIPDRVRFDLRAEVMKVFEFFEAWAEERNITLKFNGMP 367
           E   M +M++DMLFLA+AD+  L+P      L  EV  + E++   AE+ ++ +   G  
Sbjct: 278 ELQWMAQMINDMLFLAKADHGLLVPGDAPLALHDEVDALLEYYAPLAEDSDVQMLREG-E 336

Query: 368 CLVEGDPQMFRRAINNLLSNALRYTPEGQAITVSIREQESFFDLVIENPGKPIPEEHLSR 427
            ++ GD  M RRA++NLL NA+R+TP G  I V++    +   + + N G  I    L R
Sbjct: 337 AVLHGDQHMLRRALSNLLDNAMRFTPAGGQIKVTLGPGPT---INVANTGLAIDPAALPR 393

Query: 428 LFDRFYRVDPSRQR-KGEGSGIGLAIVKSIVEAHHGRVQVESDVRSTRFIL 477
           LFDRFYRVDP+R+    E +G+GLAI +SIV+AH G ++ E +   TRF++
Sbjct: 394 LFDRFYRVDPARREGSSEHAGLGLAITRSIVQAHGGCIRAECEGGWTRFVI 444