Pairwise Alignments

Query, 420 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

Subject, 866 a.a., Rac prophage; exonuclease VIII, 5' -> 3' specific dsDNA exonuclease (NCBI) from Escherichia coli BW25113

 Score = 43.5 bits (101), Expect = 3e-08
 Identities = 33/135 (24%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 262 KFLNRKNGMAEVAFFTRDPETGLMLKCKVDWLTAVKNFIVPCDLKTTRSANPALAAYQFA 321
           ++L    G AE + +  DPETG++ +C+ D +    ++I+  D+KTT        AY   
Sbjct: 719 QWLVESAGHAESSIYWEDPETGILCRCRPDKIIPEFHWIM--DVKTTADIQRFKTAYY-- 774

Query: 322 DLRYDLQAVFYLKVIKPHLKETEYAERLFPLITVETGDCAICEVFELHDDDWVIAEQDLP 381
           D RY +Q  FY    +           L    T+E G   + E+F + ++  +  +Q+  
Sbjct: 775 DYRYHVQDAFYSDGYEAQFGVQPTFVFLVASTTIECGRYPV-EIFMMGEEAKLAGQQEYH 833

Query: 382 IILQNMKNSIKKNEY 396
             L+ + + +  +E+
Sbjct: 834 RNLRTLSDCLNTDEW 848



 Score = 30.4 bits (67), Expect = 2e-04
 Identities = 14/32 (43%), Positives = 19/32 (59%)

Query: 67  GVYSDIPNDVYHSLDAISSSQVKCYADSPMKY 98
           G+Y  I N+ YH+   IS SQ+   AD+P  Y
Sbjct: 598 GIYYGISNENYHAGPGISKSQLDDIADTPALY 629