SEED Subsystem: DNA-replication in Rhodanobacter denitrificans FW104-10B01

Experiments:

Role Gene Name  
ATP-dependent DNA helicase RecG (EC 3.6.1.-) LRK54_RS11805
ATP-dependent DNA helicase RecQ LRK54_RS13000
Arrested fork binding No genes
Chromosomal replication initiator protein DnaA LRK54_RS08485
  LRK54_RS12960
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) LRK54_RS04915
DNA polymerase I (EC 2.7.7.7) LRK54_RS03865
  LRK54_RS06840
DNA polymerase II (EC 2.7.7.7) No genes
DNA polymerase III alpha subunit (EC 2.7.7.7) LRK54_RS00235
  LRK54_RS03335
DNA polymerase III beta subunit (EC 2.7.7.7) LRK54_RS08480
DNA polymerase III chi subunit (EC 2.7.7.7) LRK54_RS12370
DNA polymerase III delta prime subunit (EC 2.7.7.7) LRK54_RS01150
DNA polymerase III delta subunit (EC 2.7.7.7) LRK54_RS02770
DNA polymerase III epsilon subunit (EC 2.7.7.7) LRK54_RS16780
DNA polymerase III psi subunit (EC 2.7.7.7) No genes
DNA polymerase III subunits gamma and tau (EC 2.7.7.7) LRK54_RS01260
DNA polymerase III theta subunit (EC 2.7.7.7) No genes
DNA primase (EC 2.7.7.-) LRK54_RS07055
DNA primase (EC 2.7.7.-), phage-associated No genes
DNA primase TraC (EC 2.7.7.-) No genes
DNA repair protein RecN LRK54_RS17960
DNA replication protein DnaC No genes
DNA replication terminus site-binding protein No genes
Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) LRK54_RS02185
Exodeoxyribonuclease V beta chain (EC 3.1.11.5) LRK54_RS02180
Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) LRK54_RS02175
Helicase PriA essential for oriC/DnaA-independent DNA replication LRK54_RS11075
Helicase loader DnaI No genes
Holliday junction DNA helicase RuvA LRK54_RS04910
Holliday junction DNA helicase RuvB LRK54_RS04900
Primosomal protein I No genes
Primosomal replication protein N No genes
Primosomal replication protein N prime prime No genes
RecA protein LRK54_RS14980
Recombination protein RecR LRK54_RS01250
Replicative DNA helicase (EC 3.6.1.-) LRK54_RS02530
Replicative DNA helicase (EC 3.6.1.-) [SA14-24] No genes
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) LRK54_RS00315
Transcription-repair coupling factor LRK54_RS02040

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