SEED Subsystem: Polyhydroxybutyrate metabolism in Pseudomonas fluorescens FW300-N2E2

Experiments:

Role Gene Name  
3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) Pf6N2E2_1833
  Pf6N2E2_1850
  Pf6N2E2_1922
  Pf6N2E2_2290
  Pf6N2E2_3894
  Pf6N2E2_6000
3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) No genes
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) Pf6N2E2_1722
3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) Pf6N2E2_1850
  Pf6N2E2_1922
  Pf6N2E2_2290
  Pf6N2E2_3894
  Pf6N2E2_6000
3-ketoacyl-CoA thiolase (EC 2.3.1.16) Pf6N2E2_1145
  Pf6N2E2_2539
Acetoacetyl-CoA reductase (EC 1.1.1.36) No genes
Acetoacetyl-CoA synthetase (EC 6.2.1.16) Pf6N2E2_2042
  Pf6N2E2_2190
  Pf6N2E2_5827
Acetyl-CoA acetyltransferase (EC 2.3.1.9) Pf6N2E2_2113
Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9) No genes
Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9) No genes
D(-)-3-hydroxybutyrate oligomer hydrolase (EC 3.1.1.22) No genes
D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) Pf6N2E2_2041
D-beta-hydroxybutyrate permease Pf6N2E2_2040
Enoyl-CoA hydratase (EC 4.2.1.17) Pf6N2E2_1013
  Pf6N2E2_1046
  Pf6N2E2_1834
  Pf6N2E2_1835
  Pf6N2E2_1840
  Pf6N2E2_1922
  Pf6N2E2_1934
  Pf6N2E2_1935
  Pf6N2E2_2290
  Pf6N2E2_2773
  Pf6N2E2_3894
  Pf6N2E2_5493
Intracellular PHB depolymerase (EC 3.1.1.-) No genes
Poly(3-hydroxyalkanoate) depolymerase Pf6N2E2_3773
Polyhydroxyalkanoate granule-associated protein PhaF Pf6N2E2_3776
Polyhydroxyalkanoic acid synthase Pf6N2E2_3772
  Pf6N2E2_3774
Putative 3-hydroxyacyl-coa dehydrogenase No genes
Short chain fatty acids transporter Pf6N2E2_5193
polyhydroxyalkanoate granule-associated protein PhaI Pf6N2E2_3777
polyhydroxyalkanoate synthesis repressor PhaR No genes

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