SEED Subsystem: Oxidative stress in Pseudomonas fluorescens FW300-N2E2

Experiments:

Role Gene Name  
Alkyl hydroperoxide reductase subunit C-like protein Pf6N2E2_4501
  Pf6N2E2_5586
Catalase (EC 1.11.1.6) Pf6N2E2_1252
  Pf6N2E2_1898
  Pf6N2E2_2199
  Pf6N2E2_3430
  Pf6N2E2_4170
  Pf6N2E2_4886
  Pf6N2E2_5074
  Pf6N2E2_5769
DNA binding protein starved cells-like peroxide resistance protein No genes
Fe2+/Zn2+ uptake regulation proteins Pf6N2E2_1085
Ferric uptake regulation protein No genes
Ferric uptake regulation protein FUR Pf6N2E2_3371
Ferroxidase (EC 1.16.3.1) Pf6N2E2_5529
Fumarate and nitrate reduction regulatory protein Pf6N2E2_2323
Heme oxygenase HemO, associated with heme uptake Pf6N2E2_2903
Hydrogen peroxide-inducible genes activator Pf6N2E2_1911
  Pf6N2E2_3449
  Pf6N2E2_3889
  Pf6N2E2_4353
Iron-binding ferritin-like antioxidant protein Pf6N2E2_5529
Iron-responsive regulator Irr No genes
Manganese superoxide dismutase (EC 1.15.1.1) Pf6N2E2_3274
Metallothionein No genes
Nitrite-sensitive transcriptional repressor NsrR No genes
NnrS protein involved in response to NO Pf6N2E2_714
Non-specific DNA-binding protein Dps Pf6N2E2_5529
Organic hydroperoxide resistance protein Pf6N2E2_2459
  Pf6N2E2_4181
Organic hydroperoxide resistance transcriptional regulator Pf6N2E2_2443
  Pf6N2E2_2458
Paraquat-inducible protein A Pf6N2E2_2139
  Pf6N2E2_2140
  Pf6N2E2_5181
  Pf6N2E2_5182
Paraquat-inducible protein B Pf6N2E2_2141
  Pf6N2E2_5183
Peroxidase (EC 1.11.1.7) Pf6N2E2_3430
Peroxidase/catalase HPI (EC 1.11.1.6) No genes
Peroxide stress regulator No genes
Peroxide stress regulator PerR, FUR family No genes
Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) Pf6N2E2_3852
Probable peroxiredoxin (EC 1.11.1.15) No genes
Redox-sensitive transcriptional activator SoxR Pf6N2E2_6074
Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein) No genes
Regulatory protein SoxS No genes
Rubrerythrin No genes
Superoxide dismutase (EC 1.15.1.1) No genes
Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) No genes
Superoxide dismutase [Fe] (EC 1.15.1.1) Pf6N2E2_2851
Superoxide dismutase [Mn/Fe] (EC 1.15.1.1) No genes
Superoxide dismutase [Mn] (EC 1.15.1.1) No genes
Superoxide reductase (EC 1.15.1.2) No genes
Thioredoxin peroxidase 1 (EC 1.6.4.-) No genes
Transcriptional regulator, Crp/Fnr family No genes
Transcriptional regulator, FUR family No genes
Zinc uptake regulation protein ZUR Pf6N2E2_4166
bacteriophytochrome heme oxygenase BphO Pf6N2E2_3851
superoxide dismutase [Fe-Zn] (EC 1.15.1.1) No genes
transcriptional regulator, Crp/Fnr family Pf6N2E2_1516
  Pf6N2E2_2714
  Pf6N2E2_3997
transcriptional regulator, Fur family No genes

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