SEED Subsystem: Lysine degradation in Pseudomonas fluorescens FW300-N2E2

Experiments:

Role Gene Name  
5-aminopentanamidase (EC 3.5.1.30) Pf6N2E2_4777
5-aminovalerate aminotransferase (EC 2.6.1.48) Pf6N2E2_4013
Beta-lysine acetyltransferase (EC 2.3.1.-) No genes
Delta 1-piperideine-2-carboxylate reductase (EC 1.5.1.21) Pf6N2E2_1089
Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) No genes
L-aminoadipate-semialdehyde dehydrogenase large subunit (EC 1.2.1.31) No genes
L-beta-lysine 5,6-aminomutase alpha subunit (EC 5.4.3.3) No genes
L-beta-lysine 5,6-aminomutase beta subunit (EC 5.4.3.3) No genes
L-lysine aminomutase regulator No genes
L-lysine permease Pf6N2E2_2789
  Pf6N2E2_3245
  Pf6N2E2_5469
L-pipecolate dehydrogenase (EC 1.5.99.3) Pf6N2E2_3582
L-pipecolate oxidase (1.5.3.7) Pf6N2E2_3581
Lysine 2,3-aminomutase (EC 5.4.3.2) Pf6N2E2_2163
Lysine 2-monooxygenase (EC 1.13.12.2) Pf6N2E2_4778
Lysine decarboxylase (EC 4.1.1.18) No genes
Lysine decarboxylase 2, constitutive (EC 4.1.1.18) No genes
Lysine decarboxylase, inducible (EC 4.1.1.18) No genes
Lysine ketoglutarate reductase (EC 1.5.1.8) (LOR) (LKR) No genes
Lysine/cadaverine antiporter membrane protein CadB No genes
Outer membrane porin, OprD family Pf6N2E2_1193
  Pf6N2E2_1513
  Pf6N2E2_3309
  Pf6N2E2_3873
  Pf6N2E2_4498
  Pf6N2E2_5524
Saccharopine dehydrogenase (EC 1.5.1.9) No genes
Saccharopine dehydrogenase [NAD+, L-lysine-forming] (EC 1.5.1.7) No genes
Saccharopine dehydrogenase [NADP , L-glutamate-forming] (EC 1.5.1.10) No genes
Transcriptional activator of cad operon No genes

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