SEED Subsystem: Polyhydroxybutyrate metabolism in Pseudomonas fluorescens FW300-N2E3

Experiments:

Role Gene Name  
3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) AO353_00510
  AO353_01155
3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) No genes
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) AO353_27535
3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) AO353_00510
  AO353_01155
3-ketoacyl-CoA thiolase (EC 2.3.1.16) AO353_05785
  AO353_25685
Acetoacetyl-CoA reductase (EC 1.1.1.36) AO353_01060
Acetoacetyl-CoA synthetase (EC 6.2.1.16) AO353_02215
  AO353_20355
  AO353_21765
Acetyl-CoA acetyltransferase (EC 2.3.1.9) AO353_27945
Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9) No genes
Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9) No genes
D(-)-3-hydroxybutyrate oligomer hydrolase (EC 3.1.1.22) No genes
D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) AO353_21770
D-beta-hydroxybutyrate permease AO353_21775
Enoyl-CoA hydratase (EC 4.2.1.17) AO353_00510
  AO353_03780
  AO353_17555
  AO353_19125
  AO353_23055
  AO353_24830
Intracellular PHB depolymerase (EC 3.1.1.-) No genes
Poly(3-hydroxyalkanoate) depolymerase AO353_12410
Polyhydroxyalkanoate granule-associated protein PhaF AO353_12395
Polyhydroxyalkanoic acid synthase AO353_01070
  AO353_12405
  AO353_12415
Putative 3-hydroxyacyl-coa dehydrogenase No genes
Short chain fatty acids transporter AO353_14615
polyhydroxyalkanoate granule-associated protein PhaI AO353_12390
polyhydroxyalkanoate synthesis repressor PhaR No genes

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