SEED Subsystem: Polyamine Metabolism in Pseudomonas fluorescens FW300-N2E3

Experiments:

Role Gene Name  
4-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) AO353_04265
  AO353_04290
5'-methylthioadenosine nucleosidase (EC 3.2.2.16) No genes
ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) AO353_03855
  AO353_04270
  AO353_07260
  AO353_24800
  AO353_25435
Agmatinase (EC 3.5.3.11) AO353_18400
Agmatine deiminase (EC 3.5.3.12) AO353_11915
  AO353_28700
  AO353_28730
  AO353_28745
Agmatine/putrescine antiporter, associated with agmatine catabolism No genes
Arginine decarboxylase (EC 4.1.1.19) AO353_05445
Arginine decarboxylase, catabolic (EC 4.1.1.19) No genes
Arginine/agmatine antiporter No genes
Arginine/ornithine antiporter No genes
Arginine/ornithine antiporter ArcD AO353_03465
  AO353_20050
Biosynthetic arginine decarboxylase (EC 4.1.1.19) AO353_13720
Carbamate kinase (EC 2.7.2.2) AO353_03480
Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-) No genes
Carboxynorspermidine dehydrogenase, putative (EC 1.1.1.-) No genes
DNA-binding response regulator, LuxR family, near polyamine transporter AO353_07270
N-carbamoylputrescine amidase (3.5.1.53) AO353_11910
  AO353_28740
Ornithine decarboxylase (EC 4.1.1.17) AO353_05445
Predicted chaperone lipoprotein YacC, potentially involved in protein secretion No genes
Predicted polyamine sensor NspS, involved in biofilm formation No genes
Probable spermidine/putrescine substrate binding protein in Mollicutes No genes
Probable two-component sensor, near polyamine transporter AO353_07275
Putative GntR-family regulatory protein and aminotransferase near polyamine transporter No genes
Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) AO353_08575
  AO353_08580
  AO353_09980
  AO353_24775
Putrescine carbamoyltransferase (EC 2.1.3.6) No genes
Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) AO353_03840
  AO353_04275
  AO353_07265
  AO353_25420
Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) AO353_08570
  AO353_29310
Putrescine transport system permease protein PotH (TC 3.A.1.11.2) AO353_08565
  AO353_29315
Putrescine transport system permease protein PotI (TC 3.A.1.11.2) AO353_08560
  AO353_29320
Putrescine-ornithine antiporter No genes
Putrescine/proton symporter, putrescine/ornithine antiporter PotE No genes
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), eukaryotic No genes
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1A AO353_07190
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1B No genes
Spermidine N1-acetyltransferase (EC 2.3.1.57) No genes
Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) AO353_04280
  AO353_07255
  AO353_25425
Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) AO353_04285
  AO353_07250
  AO353_25430
Spermidine synthase (EC 2.5.1.16) AO353_02195
  AO353_19120
Transcriptional regulator of catabolic arginine decarboxylase (adiA) No genes
Transcriptional regulator, MerR family, near polyamine transporter No genes
Transcriptional regulator, TetR family, associated with agmatine catabolism No genes
Transcriptional regulator, luxR family, associated with agmatine catabolism No genes

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