SEED Subsystem: Polyamine Metabolism in Pseudomonas stutzeri RCH2

Experiments:

Role Gene Name  
4-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) No genes
5'-methylthioadenosine nucleosidase (EC 3.2.2.16) No genes
ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Psest_3657
Agmatinase (EC 3.5.3.11) No genes
Agmatine deiminase (EC 3.5.3.12) Psest_4291
Agmatine/putrescine antiporter, associated with agmatine catabolism No genes
Arginine decarboxylase (EC 4.1.1.19) Psest_3350
Arginine decarboxylase, catabolic (EC 4.1.1.19) No genes
Arginine/agmatine antiporter No genes
Arginine/ornithine antiporter No genes
Arginine/ornithine antiporter ArcD Psest_0230
  Psest_0273
  Psest_2808
Biosynthetic arginine decarboxylase (EC 4.1.1.19) Psest_3366
Carbamate kinase (EC 2.7.2.2) Psest_0270
Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-) No genes
Carboxynorspermidine dehydrogenase, putative (EC 1.1.1.-) No genes
DNA-binding response regulator, LuxR family, near polyamine transporter Psest_3659
N-carbamoylputrescine amidase (3.5.1.53) Psest_4290
Ornithine decarboxylase (EC 4.1.1.17) Psest_3350
Predicted chaperone lipoprotein YacC, potentially involved in protein secretion No genes
Predicted polyamine sensor NspS, involved in biofilm formation Psest_3900
Probable spermidine/putrescine substrate binding protein in Mollicutes No genes
Probable two-component sensor, near polyamine transporter Psest_3660
Putative GntR-family regulatory protein and aminotransferase near polyamine transporter No genes
Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) Psest_4283
  Psest_4284
Putrescine carbamoyltransferase (EC 2.1.3.6) No genes
Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) Psest_3658
Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) Psest_4282
Putrescine transport system permease protein PotH (TC 3.A.1.11.2) Psest_4281
Putrescine transport system permease protein PotI (TC 3.A.1.11.2) Psest_4280
Putrescine-ornithine antiporter No genes
Putrescine/proton symporter, putrescine/ornithine antiporter PotE No genes
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), eukaryotic No genes
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1A No genes
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1B No genes
Spermidine N1-acetyltransferase (EC 2.3.1.57) No genes
Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) Psest_3656
Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) Psest_3655
Spermidine synthase (EC 2.5.1.16) Psest_1802
  Psest_1911
Transcriptional regulator of catabolic arginine decarboxylase (adiA) No genes
Transcriptional regulator, MerR family, near polyamine transporter No genes
Transcriptional regulator, TetR family, associated with agmatine catabolism No genes
Transcriptional regulator, luxR family, associated with agmatine catabolism No genes

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