SEED Subsystem: Oxidative stress in Xanthomonas campestris pv. campestris strain 8004

Experiments:

Role Gene Name  
Alkyl hydroperoxide reductase subunit C-like protein No genes
Catalase (EC 1.11.1.6) Xcc-8004.3762.1
  Xcc-8004.3884.1
  Xcc-8004.4955.1
  Xcc-8004.5014.1
DNA binding protein starved cells-like peroxide resistance protein No genes
Fe2+/Zn2+ uptake regulation proteins No genes
Ferric uptake regulation protein No genes
Ferric uptake regulation protein FUR Xcc-8004.3432.1
Ferroxidase (EC 1.16.3.1) Xcc-8004.1478.1
Fumarate and nitrate reduction regulatory protein No genes
Heme oxygenase HemO, associated with heme uptake No genes
Hydrogen peroxide-inducible genes activator Xcc-8004.3418.1
  Xcc-8004.4224.1
Iron-binding ferritin-like antioxidant protein Xcc-8004.1478.1
Iron-responsive regulator Irr No genes
Manganese superoxide dismutase (EC 1.15.1.1) Xcc-8004.2280.1
  Xcc-8004.515.1
Metallothionein No genes
Nitrite-sensitive transcriptional repressor NsrR No genes
NnrS protein involved in response to NO No genes
Non-specific DNA-binding protein Dps Xcc-8004.1478.1
Organic hydroperoxide resistance protein Xcc-8004.340.1
Organic hydroperoxide resistance transcriptional regulator Xcc-8004.339.1
Paraquat-inducible protein A No genes
Paraquat-inducible protein B No genes
Peroxidase (EC 1.11.1.7) Xcc-8004.3762.1
Peroxidase/catalase HPI (EC 1.11.1.6) No genes
Peroxide stress regulator No genes
Peroxide stress regulator PerR, FUR family No genes
Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) Xcc-8004.5288.1
  Xcc-8004.930.1
Probable peroxiredoxin (EC 1.11.1.15) No genes
Redox-sensitive transcriptional activator SoxR Xcc-8004.1627.1
Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein) No genes
Regulatory protein SoxS No genes
Rubrerythrin No genes
Superoxide dismutase (EC 1.15.1.1) No genes
Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) Xcc-8004.254.1
  Xcc-8004.255.1
Superoxide dismutase [Fe] (EC 1.15.1.1) Xcc-8004.2013.1
Superoxide dismutase [Mn/Fe] (EC 1.15.1.1) No genes
Superoxide dismutase [Mn] (EC 1.15.1.1) No genes
Superoxide reductase (EC 1.15.1.2) No genes
Thioredoxin peroxidase 1 (EC 1.6.4.-) No genes
Transcriptional regulator, Crp/Fnr family No genes
Transcriptional regulator, FUR family No genes
Zinc uptake regulation protein ZUR Xcc-8004.1790.1
bacteriophytochrome heme oxygenase BphO No genes
superoxide dismutase [Fe-Zn] (EC 1.15.1.1) No genes
transcriptional regulator, Crp/Fnr family Xcc-8004.2952.1
transcriptional regulator, Fur family No genes

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