SEED Subsystem: Isoprenoid Biosynthesis in Xanthomonas campestris pv. campestris strain 8004

Experiments:

Role Gene Name  
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) Xcc-8004.3561.1
1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Xcc-8004.2101.1
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) Xcc-8004.3039.1
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Xcc-8004.3138.1
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Xcc-8004.3139.1
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) Xcc-8004.4174.1
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Xcc-8004.3820.1
Acetyl-CoA acetyltransferase (EC 2.3.1.9) No genes
Candidate gene for the hypothesized phosphomevalonate decarboxylase No genes
Dimethylallyltransferase (EC 2.5.1.1) No genes
Diphosphomevalonate decarboxylase (EC 4.1.1.33) No genes
Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) No genes
Hydroxymethylglutaryl-CoA reductase (EC 1.1.1.34) No genes
Hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10) No genes
Isopentenyl phosphate kinase No genes
Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) No genes
Isopentenyl-diphosphate delta-isomerase, FMN-dependent (EC 5.3.3.2) No genes
Mevalonate kinase (EC 2.7.1.36) No genes
Phosphomevalonate kinase (EC 2.7.4.2) No genes
Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) No genes

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