SEED Subsystem: DNA Repair Base Excision in Xanthomonas campestris pv. campestris strain 8004

Experiments:

Role Gene Name  
ATP-dependent DNA ligase (EC 6.5.1.1) No genes
ATP-dependent DNA ligase (EC 6.5.1.1) LigC Xcc-8004.3656.1
ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD Xcc-8004.140.1
  Xcc-8004.2247.1
DNA ligase (EC 6.5.1.2) Xcc-8004.3306.1
DNA polymerase I (EC 2.7.7.7) Xcc-8004.5105.1
DNA polymerase II (EC 2.7.7.7) No genes
DNA-3-methyladenine glycosylase (EC 3.2.2.20) Xcc-8004.1718.1
DNA-3-methyladenine glycosylase II (EC 3.2.2.21) Xcc-8004.2237.1
  Xcc-8004.3853.1
Endonuclease III (EC 4.2.99.18) Xcc-8004.3350.1
Endonuclease VIII No genes
Exodeoxyribonuclease I (EC 3.1.11.1) Xcc-8004.3329.1
Flap structure-specific endonuclease (EC 3.-.-.-) No genes
Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) Xcc-8004.5281.1
Ku domain protein Xcc-8004.139.1
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) Xcc-8004.2909.1
Single-stranded-DNA-specific exonuclease RecJ, clostridial paralog No genes
Single-stranded-DNA-specific exonuclease RecJ, cyanobacterial paralog No genes
Uracil-DNA glycosylase, family 1 Xcc-8004.4773.1

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