SEED Subsystem: Ribosome biogenesis bacterial in Vibrio cholerae E7946 ATCC 55056

Experiments:

Role Gene Name  
16S rRNA processing protein RimM CSW01_03000
Dimethyladenosine transferase (EC 2.1.1.-) No genes
Inactive homolog of metal-dependent proteases, putative molecular chaperone No genes
LSU m3Psi1915 methyltransferase RlmH CSW01_04865
LSU m5C1962 methyltransferase RlmI CSW01_06820
RNA pseudouridylate synthase, group 1 No genes
Ribonuclease E (EC 3.1.26.12) CSW01_10145
Ribonuclease M5 (EC 3.1.26.8) No genes
Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) CSW01_12700
  CSW01_14535
Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) CSW01_10130
Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) CSW01_03695
Ribosomal protein L11 methyltransferase (EC 2.1.1.-) CSW01_01500
Ribosomal protein S6 glutaminyl transferase CSW01_11610
Ribosomal-protein-L7p-serine acetyltransferase No genes
Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) CSW01_03460
Ribosomal-protein-S5p-alanine acetyltransferase CSW01_06610
Similar to ribosomal large subunit pseudouridine synthase A No genes
Similar to ribosomal large subunit pseudouridine synthase A, group 2 No genes
Similar to ribosomal large subunit pseudouridine synthase D, Bacillus subtilis YhcT type No genes
Similar to ribosomal large subunit pseudouridine synthase D, Bacillus subtilis YjbO type No genes
Similar to ribosomal large subunit pseudouridine synthase D, CAC1266-type No genes
Similar to ribosomal large subunit pseudouridine synthase D, TTE1780-type No genes
hypothetical protein sometimes fused to ribosomal protein S6 glutaminyl transferase CSW01_11605
tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) CSW01_03005

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