SEED Subsystem: Polyamine Metabolism in Vibrio cholerae E7946 ATCC 55056

Experiments:

Role Gene Name  
4-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) No genes
5'-methylthioadenosine nucleosidase (EC 3.2.2.16) No genes
ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) CSW01_07140
  CSW01_07145
  CSW01_19630
Agmatinase (EC 3.5.3.11) CSW01_18230
Agmatine deiminase (EC 3.5.3.12) No genes
Agmatine/putrescine antiporter, associated with agmatine catabolism No genes
Arginine decarboxylase (EC 4.1.1.19) No genes
Arginine decarboxylase, catabolic (EC 4.1.1.19) No genes
Arginine/agmatine antiporter No genes
Arginine/ornithine antiporter No genes
Arginine/ornithine antiporter ArcD CSW01_01945
  CSW01_01970
  CSW01_02240
  CSW01_02275
  CSW01_04965
  CSW01_06220
  CSW01_07960
  CSW01_08230
  CSW01_08780
  CSW01_09370
  CSW01_09570
  CSW01_10715
  CSW01_14250
  CSW01_19160
Biosynthetic arginine decarboxylase (EC 4.1.1.19) CSW01_18235
Carbamate kinase (EC 2.7.2.2) No genes
Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-) No genes
Carboxynorspermidine dehydrogenase, putative (EC 1.1.1.-) No genes
DNA-binding response regulator, LuxR family, near polyamine transporter No genes
N-carbamoylputrescine amidase (3.5.1.53) No genes
Ornithine decarboxylase (EC 4.1.1.17) CSW01_19405
Predicted chaperone lipoprotein YacC, potentially involved in protein secretion No genes
Predicted polyamine sensor NspS, involved in biofilm formation CSW01_03675
Probable spermidine/putrescine substrate binding protein in Mollicutes No genes
Probable two-component sensor, near polyamine transporter No genes
Putative GntR-family regulatory protein and aminotransferase near polyamine transporter No genes
Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) No genes
Putrescine carbamoyltransferase (EC 2.1.3.6) No genes
Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) CSW01_07160
Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) No genes
Putrescine transport system permease protein PotH (TC 3.A.1.11.2) No genes
Putrescine transport system permease protein PotI (TC 3.A.1.11.2) No genes
Putrescine-ornithine antiporter No genes
Putrescine/proton symporter, putrescine/ornithine antiporter PotE CSW01_19400
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), eukaryotic No genes
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1A No genes
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1B No genes
Spermidine N1-acetyltransferase (EC 2.3.1.57) CSW01_18865
Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) CSW01_07155
Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) CSW01_07150
Spermidine synthase (EC 2.5.1.16) No genes
Transcriptional regulator of catabolic arginine decarboxylase (adiA) No genes
Transcriptional regulator, MerR family, near polyamine transporter No genes
Transcriptional regulator, TetR family, associated with agmatine catabolism No genes
Transcriptional regulator, luxR family, associated with agmatine catabolism No genes

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