SEED Subsystem: DNA repair, bacterial in Vibrio cholerae E7946 ATCC 55056

Experiments:

Role Gene Name  
A/G-specific adenine glycosylase (EC 3.2.2.-) CSW01_02410
  CSW01_05285
ADA regulatory protein CSW01_19185
Alkylated DNA repair protein AlkB CSW01_18930
DNA mismatch repair endonuclease MutH CSW01_03515
DNA polymerase IV (EC 2.7.7.7) CSW01_11635
DNA polymerase-like protein MT3142 No genes
DNA polymerase-like protein PA0670 No genes
DNA recombination protein RmuC CSW01_00440
DNA recombination-dependent growth factor C CSW01_03755
DNA repair exonuclease family protein YhaO No genes
DNA repair protein RadA CSW01_11870
DNA repair protein RadC CSW01_01155
  CSW01_02700
  CSW01_08960
DNA repair protein RecN CSW01_04395
DNA-damage-inducible protein I No genes
DNA-damage-inducible protein J CSW01_15610
  CSW01_15800
  CSW01_16770
Endonuclease IV (EC 3.1.21.2) CSW01_11955
Endonuclease V (EC 3.1.21.7) No genes
Exodeoxyribonuclease III (EC 3.1.11.2) CSW01_09315
Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) CSW01_03975
Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) CSW01_04570
Exonuclease SbcC CSW01_16845
Exonuclease SbcD CSW01_16840
G:T/U mismatch-specific uracil/thymine DNA-glycosylase No genes
Methyl-directed repair DNA adenine methylase (EC 2.1.1.72) CSW01_13290
Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) CSW01_19180
RecA protein CSW01_02875
Recombinational DNA repair protein RecT (prophage associated) No genes
SOS-response repressor and protease LexA (EC 3.4.21.88) CSW01_00490
Single-stranded DNA-binding protein CSW01_02095
Very-short-patch mismatch repair endonuclease (G-T specific) No genes

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