SEED Subsystem: Biphenyl Degradation in Vibrio cholerae E7946 ATCC 55056

Experiments:

Role Gene Name  
2,3-dihydroxybiphenyl 1,2-dioxygenase No genes
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-) No genes
2-hydroxypenta-2,4-dienoate hydratase No genes
2-keto-4-pentenoate hydratase (EC 4.2.1.-) No genes
4-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-) No genes
Acetaldehyde dehydrogenase (EC 1.2.1.10) No genes
Acetaldehyde dehydrogenase, acetylating, (EC 1.2.1.10) in gene cluster for degradation of phenols, cresols, catechol No genes
Biphenyl dioxygenase alpha subunit (EC 1.14.12.18) No genes
Biphenyl dioxygenase beta subunit (EC 1.14.12.18) No genes
Biphenyl dioxygenase system ferredoxin component No genes
Biphenyl dioxygenase system ferredoxin--NAD( ) reductase component (EC 1.18.1.3) No genes
Biphenyl-2,3-diol 1,2-dioxygenase (EC 1.13.11.39) No genes
Dihydrodiol dehydrogenase (EC 1.3.1.56) No genes
Large subunit naph/bph dioxygenase No genes
Small subunit naph/bph dioxygenase No genes
biphenyl-2,3-diol 1,2-dioxygenase III-related protein CSW01_15625
  CSW01_15745
  CSW01_15905
  CSW01_16510
  CSW01_16535
  CSW01_16555
biphenyl-2,3-diol 1,2-dioxygenase III-related protein VCA0463 VCA0328 VCA0341 No genes

Or select organism:

Or view this subsystem at the SEED (slow)