SEED Subsystem: Polyamine Metabolism in Pseudomonas syringae pv. syringae B728a

Experiments:

Role Gene Name  
4-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) No genes
5'-methylthioadenosine nucleosidase (EC 3.2.2.16) No genes
ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Psyr_4614
Agmatinase (EC 3.5.3.11) No genes
Agmatine deiminase (EC 3.5.3.12) Psyr_4932
Agmatine/putrescine antiporter, associated with agmatine catabolism No genes
Arginine decarboxylase (EC 4.1.1.19) Psyr_2547
  Psyr_4247
Arginine decarboxylase, catabolic (EC 4.1.1.19) No genes
Arginine/agmatine antiporter No genes
Arginine/ornithine antiporter No genes
Arginine/ornithine antiporter ArcD Psyr_2683
Biosynthetic arginine decarboxylase (EC 4.1.1.19) Psyr_4381
Carbamate kinase (EC 2.7.2.2) Psyr_2686
Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-) No genes
Carboxynorspermidine dehydrogenase, putative (EC 1.1.1.-) No genes
DNA-binding response regulator, LuxR family, near polyamine transporter Psyr_4618
N-carbamoylputrescine amidase (3.5.1.53) No genes
Ornithine decarboxylase (EC 4.1.1.17) Psyr_2547
  Psyr_4247
Predicted chaperone lipoprotein YacC, potentially involved in protein secretion No genes
Predicted polyamine sensor NspS, involved in biofilm formation No genes
Probable spermidine/putrescine substrate binding protein in Mollicutes No genes
Probable two-component sensor, near polyamine transporter Psyr_4619
Putative GntR-family regulatory protein and aminotransferase near polyamine transporter No genes
Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) Psyr_4864
  Psyr_4865
Putrescine carbamoyltransferase (EC 2.1.3.6) No genes
Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) Psyr_1602
  Psyr_4615
Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) Psyr_4863
Putrescine transport system permease protein PotH (TC 3.A.1.11.2) Psyr_4862
Putrescine transport system permease protein PotI (TC 3.A.1.11.2) Psyr_4861
Putrescine-ornithine antiporter No genes
Putrescine/proton symporter, putrescine/ornithine antiporter PotE No genes
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), eukaryotic No genes
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1A Psyr_4575
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1B No genes
Spermidine N1-acetyltransferase (EC 2.3.1.57) No genes
Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) Psyr_2400
  Psyr_4613
Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) Psyr_4612
Spermidine synthase (EC 2.5.1.16) Psyr_1864
  Psyr_3621
Transcriptional regulator of catabolic arginine decarboxylase (adiA) No genes
Transcriptional regulator, MerR family, near polyamine transporter No genes
Transcriptional regulator, TetR family, associated with agmatine catabolism No genes
Transcriptional regulator, luxR family, associated with agmatine catabolism No genes

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