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SEED Subsystem: Flagellum in
Pseudomonas syringae pv. syringae B728a
Experiments:
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Role
Gene
Name
Flagellar L-ring protein FlgH
Psyr
_3474
Flagellar M-ring protein FliF
Psyr
_3457
Flagellar P-ring protein FlgI
Psyr
_3473
Flagellar assembly protein FliH
Psyr
_3455
Flagellar basal-body P-ring formation protein FlgA
Psyr
_3487
Flagellar basal-body rod modification protein FlgD
Psyr
_3479
Flagellar basal-body rod protein FlgB
Psyr
_3481
Flagellar basal-body rod protein FlgC
Psyr
_3480
Flagellar basal-body rod protein FlgF
Psyr
_3476
Flagellar basal-body rod protein FlgG
Psyr
_3475
Flagellar biosynthesis protein FlgN
Psyr
_3489
Flagellar biosynthesis protein FlhA
Psyr
_3440
Flagellar biosynthesis protein FlhB
Psyr
_3441
Flagellar biosynthesis protein FlhF
Psyr
_3439
Flagellar biosynthesis protein FliC
No genes
Flagellar biosynthesis protein FliL
Psyr
_0314
Psyr
_3448
Flagellar biosynthesis protein FliO
No genes
Flagellar biosynthesis protein FliP
Psyr
_3444
Flagellar biosynthesis protein FliQ
Psyr
_3443
Psyr
_3445
Flagellar biosynthesis protein FliR
Psyr
_3442
Flagellar biosynthesis protein FliS
Psyr
_3463
Flagellar biosynthesis protein FliT
No genes
Flagellar biosynthesis protein FliZ
No genes
Flagellar hook protein FlgE
Psyr
_3477
Psyr
_3478
Flagellar hook-associated protein 3
No genes
Flagellar hook-associated protein FlgK
Psyr
_3471
Flagellar hook-associated protein FlgL
Psyr
_3470
Flagellar hook-associated protein FliD
Psyr
_3464
Flagellar hook-basal body complex protein FliE
Psyr
_3458
Flagellar hook-length control protein FliK
Psyr
_3449
Flagellar motor rotation protein MotA
Psyr
_0561
Psyr
_3432
Flagellar motor rotation protein MotB
Psyr
_0562
Psyr
_3431
Flagellar motor switch protein FliG
Psyr
_3456
Flagellar motor switch protein FliM
Psyr
_3447
Flagellar motor switch protein FliN
Psyr
_3446
Flagellar protein FlbB
No genes
Flagellar protein FlbD
No genes
Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-)
Psyr
_3472
Flagellar protein FlhE
No genes
Flagellar protein FliJ
Psyr
_3453
Flagellar regulatory protein FleQ
Psyr
_3459
Psyr
_3461
Flagellar sensor histidine kinase FleS
Psyr
_3460
Flagellar synthesis regulator FleN
Psyr
_3438
Flagellar trans-acting factor FliX
No genes
Flagellar transcriptional activator FlhC
No genes
Flagellar transcriptional activator FlhD
No genes
Flagellin protein FlaA
Psyr
_3466
Flagellin protein FlaB
No genes
Flagellin protein FlaC
No genes
Flagellin protein FlaD
No genes
Flagellin protein FlaE
No genes
Flagellin protein FlaF
No genes
Flagellin protein FlaG
Psyr
_3465
Flagellum-specific ATP synthase FliI
Psyr
_1213
Psyr
_3454
Negative regulator of flagellin synthesis
No genes
Negative regulator of flagellin synthesis FlgM
Psyr
_3488
RNA polymerase sigma factor RpoD
Psyr
_4641
RNA polymerase sigma factor for flagellar operon
Psyr
_3437
RNA polymerase sigma-54 factor RpoN
Psyr
_4147
Or select organism:
Acidovorax sp. GW101-3H11
Acinetobacter radioresistens SK82
Agrobacterium fabrum C58
Alteromonas macleodii MIT1002
Azospirillum brasilense Sp245
Azospirillum sp. SherDot2
Bacteroides ovatus ATCC 8483
Bacteroides stercoris CC31F
Bacteroides thetaiotaomicron VPI-5482
Bifidobacterium breve UCC2003
Bosea sp. OAE506
Brevundimonas sp. GW460-12-10-14-LB2
Burkholderia phytofirmans PsJN
Castellaniella sp019104865 MT123
Caulobacter crescentus NA1000
Caulobacter crescentus NA1000 Δfur
Cupriavidus basilensis FW507-4G11
Dechlorosoma suillum PS
Desulfovibrio vulgaris Hildenborough JW710
Desulfovibrio vulgaris Miyazaki F
Dickeya dadantii 3937
Dickeya dianthicola 67-19
Dickeya dianthicola ME23
Dinoroseobacter shibae DFL-12
Dyella japonica UNC79MFTsu3.2
Echinicola vietnamensis KMM 6221, DSM 17526
Enterobacter asburiae PDN3
Enterobacter sp. TBS_079
Erwinia tracheiphila SCR3
Escherichia coli BL21
Escherichia coli BW25113
Escherichia coli ECOR27
Escherichia coli ECOR38
Escherichia coli ECRC101
Escherichia coli ECRC101
Escherichia coli ECRC102
Escherichia coli ECRC62
Escherichia coli ECRC98
Escherichia coli ECRC99
Escherichia coli HS(pFamp)R (ATCC 700891)
Escherichia coli Nissle 1917
Escherichia fergusonii Becca
Fusobacterium nucleatum SB010
Herbaspirillum seropedicae SmR1
Hydrogenophaga sp. GW460-11-11-14-LB1
Kangiella aquimarina DSM 16071
Klebsiella michiganensis M5al
Lysobacter sp. OAE881
Magnetospirillum magneticum AMB-1
Marinobacter adhaerens HP15
Methanococcus maripaludis JJ
Methanococcus maripaludis S2
Mucilaginibacter yixingensis YX-36 DSM 26809
Mycobacterium tuberculosis H37Rv
Pantoea sp. MT58
Parabacteroides merdae CL09T00C40
Paraburkholderia bryophila 376MFSha3.1
Paraburkholderia graminis OAS925
Paraburkholderia sabiae LMG 24235
Pectobacterium carotovorum WPP14
Pedobacter sp. GW460-11-11-14-LB5
Phaeobacter inhibens DSM 17395
Phocaeicola dorei CL03T12C01
Phocaeicola vulgatus CL09T03C04
Pontibacter actiniarum KMM 6156, DSM 19842
Pseudomonas fluorescens FW300-N1B4
Pseudomonas fluorescens FW300-N2C3
Pseudomonas fluorescens FW300-N2E2
Pseudomonas fluorescens FW300-N2E3
Pseudomonas fluorescens GW456-L13
Pseudomonas fluorescens SBW25
Pseudomonas fluorescens SBW25-INTG
Pseudomonas putida KT2440
Pseudomonas simiae WCS417
Pseudomonas sp. RS175
Pseudomonas sp. S08-1
Pseudomonas stutzeri RCH2
Pseudomonas syringae pv. syringae B728a
Pseudomonas syringae pv. syringae B728a ΔmexB
Rahnella sp. WP5
Ralstonia solanacearum GMI1000
Ralstonia solanacearum IBSBF1503
Ralstonia solanacearum PSI07
Ralstonia solanacearum UW163
Ralstonia sp. UNC404CL21Col
Rhizobium sp. OAE497
Rhodanobacter denitrificans FW104-10B01
Rhodanobacter denitrificans MT42
Rhodanobacter sp. FW510-T8
Rhodopseudomonas palustris CGA009
Rhodospirillum rubrum S1H
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
Serratia liquefaciens MT49
Shewanella amazonensis SB2B
Shewanella loihica PV-4
Shewanella oneidensis MR-1
Shewanella sp. ANA-3
Sinorhizobium meliloti 1021
Sphingomonas koreensis DSMZ 15582
Synechococcus elongatus PCC 7942
Variovorax sp. OAS795
Variovorax sp. SCN45
Vibrio cholerae E7946 ATCC 55056
Xanthomonas campestris pv. campestris strain 8004
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