SEED Subsystem: Experimental tye in Synechococcus elongatus PCC 7942

Experiments:

Role Gene Name  
2H phosphoesterase superfamily protein Bsu1186 (yjcG) No genes
5-aminolevulinate synthase (EC 2.3.1.37) No genes
Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases, YtcI homolog No genes
Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) Synpcc7942_0674 hemF
Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) No genes
Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22), divergent, putative No genes
Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22), divergent, putative 2 No genes
Cytochrome c-type biogenesis protein CcdA (DsbD analog) Synpcc7942_0323 ccdA
Cytochrome c-type biogenesis protein CcsA/ResC Synpcc7942_0511 ccsA
DUF1801 domain-containing protein No genes
Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Synpcc7942_0137 hemH
GNAT family acetyltransferase YjcF No genes
Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) Synpcc7942_0645 hemL
Glutamyl-tRNA reductase (EC 1.2.1.70) Synpcc7942_0504 hemA
HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase No genes
Homolog of E. coli HemY protein No genes
Hypothetical membrane protein, possible involvement in cytochrome functioning/assembly No genes
Hypothetical protein Q, similar to Chlorite dismutase No genes
Hypothetical protein SAV1831 No genes
Hypothetical protein SAV1869 No genes
Hypothetical protein, ydbS homolog No genes
Hypothetical protein, ydbT homolog No genes
Hypothetical, related to broad specificity phosphatases COG0406 No genes
Methyltransferase (EC 2.1.1.-) colocalized with Q No genes
Periplasmic/membrane protein associated with DUF414 No genes
Porphobilinogen deaminase (EC 2.5.1.61) Synpcc7942_0967 hemC
Porphobilinogen synthase (EC 4.2.1.24) Synpcc7942_1792 hemB
Possibly related to ydbT No genes
Precorrin-2 oxidase (EC 1.3.1.76) No genes
Protein of unknown function DUF414 No genes
Protoporphyrinogen IX oxidase, aerobic (EC 1.3.3.4) No genes
Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-) No genes
Putative acetyl esterase YjcH (EC 3.1.1.-) No genes
Putative lipoprotein SAV1865 No genes
Putative membrane protein Q2 colocalized with Q No genes
Putative nitroreductase family protein SACOL0874 No genes
Putative oxidoreductase ferredoxin-type protein, clusters with CPO No genes
Ribonuclease D (EC 3.1.26.3) No genes
Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) Synpcc7942_2611
Sirohydrochlorin ferrochelatase (EC 4.99.1.4) No genes
Small hypothetical protein Hyp1 No genes
Sua5 YciO YrdC YwlC family protein No genes
Uncharacterized SAV1743 homolog No genes
Uncharacterized protein Q1 colocalized with Q No genes
Uncharacterized protein UPF0344 No genes
Uncharacterized protein, homolog of B.subtilis yhgC No genes
Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Synpcc7942_1086 hemE
Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Synpcc7942_0271 cobA
  Synpcc7942_2610 cobA
Uroporphyrinogen-III synthase (EC 4.2.1.75) Synpcc7942_0272 hemD
Uroporphyrinogen-III synthase, divergent, Flavobacterial type (EC 4.2.1.75) No genes
Uroporphyrinogen-III synthase, divergent, Francisella type (EC 4.2.1.75) No genes
transmembrane protein, distant homology with ydbS No genes
transmembrane protein, distant homology with ydbT No genes

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