SEED Subsystem: DNA Repair Base Excision in Synechococcus elongatus PCC 7942

Experiments:

Role Gene Name  
ATP-dependent DNA ligase (EC 6.5.1.1) No genes
ATP-dependent DNA ligase (EC 6.5.1.1) LigC No genes
ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD No genes
DNA ligase (EC 6.5.1.2) Synpcc7942_0277 ligA
DNA polymerase I (EC 2.7.7.7) Synpcc7942_0194 polA
DNA polymerase II (EC 2.7.7.7) No genes
DNA-3-methyladenine glycosylase (EC 3.2.2.20) No genes
DNA-3-methyladenine glycosylase II (EC 3.2.2.21) Synpcc7942_0669 mpg
Endonuclease III (EC 4.2.99.18) Synpcc7942_0447 nth
Endonuclease VIII No genes
Exodeoxyribonuclease I (EC 3.1.11.1) No genes
Flap structure-specific endonuclease (EC 3.-.-.-) No genes
Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) Synpcc7942_1323 fpg
Ku domain protein No genes
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) Synpcc7942_1886 recJ
Single-stranded-DNA-specific exonuclease RecJ, clostridial paralog No genes
Single-stranded-DNA-specific exonuclease RecJ, cyanobacterial paralog Synpcc7942_0517 recJ
Uracil-DNA glycosylase, family 1 No genes

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