SEED Subsystem: Polyhydroxybutyrate metabolism in Sinorhizobium meliloti 1021

Experiments:

Role Gene Name  
3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) SM_b21632
  SMc02227
3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) SMa1408
  SMc04398
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) SMc00727
3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) SM_b21632
  SMc02227
3-ketoacyl-CoA thiolase (EC 2.3.1.16) SMc00262
Acetoacetyl-CoA reductase (EC 1.1.1.36) SMc03878
Acetoacetyl-CoA synthetase (EC 6.2.1.16) SMa0567
  SMc00774
Acetyl-CoA acetyltransferase (EC 2.3.1.9) SMc03879
Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9) No genes
Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9) No genes
D(-)-3-hydroxybutyrate oligomer hydrolase (EC 3.1.1.22) No genes
D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) SM_b21010
  SMc01698
D-beta-hydroxybutyrate permease No genes
Enoyl-CoA hydratase (EC 4.2.1.17) SM_b21632
  SM_b21633
  SMc00976
  SMc01638
  SMc01669
  SMc01806
Intracellular PHB depolymerase (EC 3.1.1.-) SMc02770
Poly(3-hydroxyalkanoate) depolymerase No genes
Polyhydroxyalkanoate granule-associated protein PhaF No genes
Polyhydroxyalkanoic acid synthase SMc00296
Putative 3-hydroxyacyl-coa dehydrogenase No genes
Short chain fatty acids transporter No genes
polyhydroxyalkanoate granule-associated protein PhaI No genes
polyhydroxyalkanoate synthesis repressor PhaR No genes

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