SEED Subsystem: Polyamine Metabolism in Sinorhizobium meliloti 1021

Experiments:

Role Gene Name  
4-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) SMc01656
5'-methylthioadenosine nucleosidase (EC 3.2.2.16) SMc00395
ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) SM_b20284
  SM_b21273
  SMa1755
  SMc01632
  SMc01652
Agmatinase (EC 3.5.3.11) SMc01802
  SMc01967
Agmatine deiminase (EC 3.5.3.12) No genes
Agmatine/putrescine antiporter, associated with agmatine catabolism No genes
Arginine decarboxylase (EC 4.1.1.19) SMc02983
Arginine decarboxylase, catabolic (EC 4.1.1.19) No genes
Arginine/agmatine antiporter No genes
Arginine/ornithine antiporter No genes
Arginine/ornithine antiporter ArcD SMa1050
  SMa1667
  SMa1668
  SMc02855
Biosynthetic arginine decarboxylase (EC 4.1.1.19) No genes
Carbamate kinase (EC 2.7.2.2) SMa0697
Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-) No genes
Carboxynorspermidine dehydrogenase, putative (EC 1.1.1.-) No genes
DNA-binding response regulator, LuxR family, near polyamine transporter No genes
N-carbamoylputrescine amidase (3.5.1.53) No genes
Ornithine decarboxylase (EC 4.1.1.17) SMc02983
Predicted chaperone lipoprotein YacC, potentially involved in protein secretion No genes
Predicted polyamine sensor NspS, involved in biofilm formation SMc00991
Probable spermidine/putrescine substrate binding protein in Mollicutes No genes
Probable two-component sensor, near polyamine transporter No genes
Putative GntR-family regulatory protein and aminotransferase near polyamine transporter No genes
Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) SMc00770
Putrescine carbamoyltransferase (EC 2.1.3.6) No genes
Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) SM_b20281
  SM_b20380
  SMa0391
  SMa0526
  SMa0953
  SMa1754
  SMc01631
  SMc01653
  SMc01965
Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) SMc00771
  SMc04393
Putrescine transport system permease protein PotH (TC 3.A.1.11.2) SM_b20382
  SMc00772
Putrescine transport system permease protein PotI (TC 3.A.1.11.2) SMc00773
Putrescine-ornithine antiporter No genes
Putrescine/proton symporter, putrescine/ornithine antiporter PotE No genes
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), eukaryotic No genes
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1A No genes
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1B No genes
Spermidine N1-acetyltransferase (EC 2.3.1.57) No genes
Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) SM_b20283
  SM_b21274
  SMa0952
  SMa1753
  SMc01633
  SMc01654
Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) SM_b20282
  SM_b21275
  SMa1751
  SMc01634
  SMc01655
Spermidine synthase (EC 2.5.1.16) No genes
Transcriptional regulator of catabolic arginine decarboxylase (adiA) No genes
Transcriptional regulator, MerR family, near polyamine transporter No genes
Transcriptional regulator, TetR family, associated with agmatine catabolism No genes
Transcriptional regulator, luxR family, associated with agmatine catabolism No genes

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