SEED Subsystem: TCA Cycle in Shewanella amazonensis SB2B

Experiments:

Role Gene Name  
2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Sama_1427 sucA
Aconitate hydratase (EC 4.2.1.3) No genes
Aconitate hydratase 2 (EC 4.2.1.3) No genes
Aconitate hydratase X, predicted No genes
Aconitate hydratase large subunit (EC 4.2.1.3) No genes
Aconitate hydratase small subunit (EC 4.2.1.3) No genes
Archaeal succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) No genes
Archaeal succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) No genes
Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) No genes
Citrate synthase (si) (EC 2.3.3.1) Sama_1422 gltA
Dihydrolipoamide dehydrogenase (EC 1.8.1.4) No genes
Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) No genes
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) No genes
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) Sama_1428
  Sama_2051
Fumarate hydratase class I (EC 4.2.1.2) No genes
Fumarate hydratase class I, aerobic (EC 4.2.1.2) Sama_1688
Fumarate hydratase class II (EC 4.2.1.2) Sama_0822
Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) No genes
Isocitrate dehydrogenase [NAD] (EC 1.1.1.41) Sama_2423
Malate dehydrogenase (EC 1.1.1.37) Sama_0672
Malate:quinone oxidoreductase (EC 1.1.5.4) No genes
Putative Dihydrolipoamide dehydrogenase (EC 1.8.1.4) No genes
Putative malate dehydrogenase (EC 1.1.1.37), similar to archaeal MJ1425 No genes
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Sama_1425 sdhA
  Sama_3220
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) Sama_1426 sdhB
  Sama_3219 frdB
Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) Sama_1430
Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) Sama_1429 sucC
Transcriptional regulator of succinyl CoA synthetase operon No genes
hypothetical protein that often co-occurs with aconitase No genes

Or select organism:

Or view this subsystem at the SEED (slow)